ID A0A1A6GVA1_NEOLE Unreviewed; 527 AA.
AC A0A1A6GVA1;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=PDZ domain-containing protein {ECO:0000259|PROSITE:PS50106};
GN ORFNames=A6R68_01601 {ECO:0000313|EMBL:OBS69859.1};
OS Neotoma lepida (Desert woodrat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC Cricetidae; Neotominae; Neotoma.
OX NCBI_TaxID=56216 {ECO:0000313|EMBL:OBS69859.1, ECO:0000313|Proteomes:UP000092124};
RN [1] {ECO:0000313|EMBL:OBS69859.1, ECO:0000313|Proteomes:UP000092124}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=417 {ECO:0000313|EMBL:OBS69859.1};
RC TISSUE=Liver {ECO:0000313|EMBL:OBS69859.1};
RA Campbell M., Oakeson K.F., Yandell M., Halpert J.R., Dearing D.;
RT "The Draft Genome Sequence and Annotation of the Desert Woodrat Neotoma
RT lepida.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the NHER family.
CC {ECO:0000256|ARBA:ARBA00038110}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBS69859.1}.
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DR EMBL; LZPO01066742; OBS69859.1; -; Genomic_DNA.
DR STRING; 56216.A0A1A6GVA1; -.
DR Proteomes; UP000092124; Unassembled WGS sequence.
DR CDD; cd00992; PDZ_signaling; 4.
DR Gene3D; 2.30.42.10; -; 4.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR041489; PDZ_6.
DR InterPro; IPR036034; PDZ_sf.
DR PANTHER; PTHR14191:SF3; GH04176P; 1.
DR PANTHER; PTHR14191; PDZ DOMAIN CONTAINING PROTEIN; 1.
DR Pfam; PF00595; PDZ; 3.
DR Pfam; PF17820; PDZ_6; 1.
DR SMART; SM00228; PDZ; 4.
DR SUPFAM; SSF50156; PDZ domain-like; 4.
DR PROSITE; PS50106; PDZ; 4.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000092124}.
FT DOMAIN 17..98
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 143..223
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 251..331
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 386..466
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT REGION 111..133
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 352..381
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 488..527
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 111..125
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 494..512
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 513..527
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 527 AA; 57217 MW; 0B70E5ABEEC3F0E0 CRC64;
MHLFFLTEMA STFSPRECKL SKQEGQNYGF FLRIEKDTDG HLVRVIEKGS PAEKAGLLDG
DRVLRINGVF VDKEEXAQVV DLVRKSGNSV TLLVLDGDSY EKAVKKQVDL KELDQSQKEP
DLNDKKPGPV MNGAVETCAQ PRLCYLVKEG NSXGFSLKTI QGKKGVYLTD ITPQGVAMXA
GVLADDLLVE VNGENVENAS HEEVVEKVKK AGSRVMFLLV DKETAKCHGE QKTQFKRETA
SLKLLPHQPR VVDIKKGSNG YGFYLRAGSG QKGQITKDIE PGSPAEAAGL KNNDXVVAVN
GVSVEGLDHD SVVEMIREGG DQTTLLVVDK EADSIYGLAR FSPLLYXQNQ ELPNGSVKEA
PAPVPAPLEV KSPDTPEDAE DHKPKLCRLI KVDDSYGFHL NAICGQPGSF VKEVQKGGPA
DKAGLADEDV IIEVNGESVQ DEPYEKVVDR IKSSGEHVTL LVCGXKAYDX FQAKKIPIVS
SMADPLAVCP DDKGELSAES EHDSHTAKER THSTASHSSS NSEDTEM
//
