ID A0A1A6H1J9_NEOLE Unreviewed; 806 AA.
AC A0A1A6H1J9;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=TRPM SLOG domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=A6R68_13170 {ECO:0000313|EMBL:OBS72251.1};
OS Neotoma lepida (Desert woodrat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC Cricetidae; Neotominae; Neotoma.
OX NCBI_TaxID=56216 {ECO:0000313|EMBL:OBS72251.1, ECO:0000313|Proteomes:UP000092124};
RN [1] {ECO:0000313|EMBL:OBS72251.1, ECO:0000313|Proteomes:UP000092124}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=417 {ECO:0000313|EMBL:OBS72251.1};
RC TISSUE=Liver {ECO:0000313|EMBL:OBS72251.1};
RA Campbell M., Oakeson K.F., Yandell M., Halpert J.R., Dearing D.;
RT "The Draft Genome Sequence and Annotation of the Desert Woodrat Neotoma
RT lepida.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBS72251.1}.
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DR EMBL; LZPO01055148; OBS72251.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1A6H1J9; -.
DR STRING; 56216.A0A1A6H1J9; -.
DR Proteomes; UP000092124; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005216; F:monoatomic ion channel activity; IEA:InterPro.
DR InterPro; IPR005821; Ion_trans_dom.
DR InterPro; IPR041491; TRPM_SLOG.
DR PANTHER; PTHR13800:SF9; TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL SUBFAMILY M MEMBER 8; 1.
DR PANTHER; PTHR13800; TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6; 1.
DR Pfam; PF00520; Ion_trans; 1.
DR Pfam; PF18139; LSDAT_euk; 1.
PE 4: Predicted;
KW Ion channel {ECO:0000256|ARBA:ARBA00023303};
KW Ion transport {ECO:0000256|ARBA:ARBA00023303};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000092124};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|ARBA:ARBA00023303}.
FT TRANSMEM 505..524
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 536..569
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 605..625
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 637..655
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 675..696
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 777..797
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1..187
FT /note="TRPM SLOG"
FT /evidence="ECO:0000259|Pfam:PF18139"
FT DOMAIN 590..787
FT /note="Ion transport"
FT /evidence="ECO:0000259|Pfam:PF00520"
FT NON_TER 806
FT /evidence="ECO:0000313|EMBL:OBS72251.1"
SQ SEQUENCE 806 AA; 92639 MW; 0826399EF781B8D6 CRC64;
MKYIGEVVRD NTISRNSEEN IVAIGIAAWG MVSNRDTLIR NCNDEGYFSA QYIMDDFKRD
PLYILDNNHT HLLLVDNGCH GHPTVEAKLR NQLEKYISER TSQDSNYGGK IPIVCFAQGG
GRETLKAINT SIKSKIPCVV VEGSGQIADV IASLVEEEDV LTSSMVKEKL VRFLPRTVSR
LPEEEIESWI KWLREILECP HLLTVIKMEE AGDEIVSNAI SYALYKAFST NEQDKDNWNG
QLKLLLEWNQ LDLASDEIFT NDRRWESADL QEVMFTALIK DRPKFVRLFL ENGLNLKKFL
TNDVLTELFS THFSTLVYRN LQIAKNSYND ALLTFVWKLV ANFRRSFWKE DRSSREDLDV
ELHDASLTTR HPLQALFIWA ILQNKKELSK VIWEQTKGCT LAALGASKLL KTLAKVKNDI
NAAGESEELA NEYETRAVEL FTECYSNDED LAEQLLVYSC EAWGGSNCLE LAVEATDQHF
IAQPGVQNFL SKQWYGEISR DTKNWKIILC LFVIPLVGCG LVSFRKKPID KHKKLLWYYV
AFFTSPFVVF SWNVVFYIAF LLLFAYVLLM DFHSIFMTDV QAAHSLSAPF LLQWYMSGVN
YFTDLWNVMD TLGIFYFIAG IVFRLHSSNT SSLYSGRVIF CLDYIIFILR LIHIFTVSRN
LGPKIIMLQR MLIDVFFFLF LFAVWMVAFG VARQGILRQN EQRWRWIFRS VIYEPYLAMF
GQVPSDVDGT TYDFSHCTFS GNESKPLCVE LDENSLPRFP EWITIPLVCV YMLSTNILLV
NLLVAMFGYV CVTIHGLPLR ALPMPG
//