ID A0A1A6H217_NEOLE Unreviewed; 604 AA.
AC A0A1A6H217;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 22-FEB-2023, entry version 20.
DE RecName: Full=Rad4 beta-hairpin domain-containing protein {ECO:0000259|SMART:SM01030};
DE Flags: Fragment;
GN ORFNames=A6R68_12782 {ECO:0000313|EMBL:OBS72633.1};
OS Neotoma lepida (Desert woodrat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC Cricetidae; Neotominae; Neotoma.
OX NCBI_TaxID=56216 {ECO:0000313|EMBL:OBS72633.1, ECO:0000313|Proteomes:UP000092124};
RN [1] {ECO:0000313|EMBL:OBS72633.1, ECO:0000313|Proteomes:UP000092124}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=417 {ECO:0000313|EMBL:OBS72633.1};
RC TISSUE=Liver {ECO:0000313|EMBL:OBS72633.1};
RA Campbell M., Oakeson K.F., Yandell M., Halpert J.R., Dearing D.;
RT "The Draft Genome Sequence and Annotation of the Desert Woodrat Neotoma
RT lepida.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBS72633.1}.
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DR EMBL; LZPO01055088; OBS72633.1; -; Genomic_DNA.
DR STRING; 56216.A0A1A6H217; -.
DR Proteomes; UP000092124; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR Gene3D; 2.20.20.110; Rad4, beta-hairpin domain BHD1; 1.
DR Gene3D; 3.90.260.10; Transglutaminase-like; 2.
DR InterPro; IPR004583; DNA_repair_Rad4.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR018325; Rad4/PNGase_transGLS-fold.
DR InterPro; IPR018326; Rad4_beta-hairpin_dom1.
DR InterPro; IPR036985; Transglutaminase-like_sf.
DR PANTHER; PTHR12135:SF0; DNA REPAIR PROTEIN COMPLEMENTING XP-C CELLS; 1.
DR PANTHER; PTHR12135; DNA REPAIR PROTEIN XP-C / RAD4; 1.
DR Pfam; PF10403; BHD_1; 1.
DR Pfam; PF03835; Rad4; 1.
DR SMART; SM01030; BHD_1; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000092124}.
FT DOMAIN 557..604
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01030"
FT REGION 12..113
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 285..449
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 63..101
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 290..317
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 330..349
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 382..396
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 407..438
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 604
FT /evidence="ECO:0000313|EMBL:OBS72633.1"
SQ SEQUENCE 604 AA; 68062 MW; 3A5742655A4A6631 CRC64;
MPCLNCQFIS KSNDFEDEKQ KPPKKCSLSK VSQGKRKRGC SDPGDPTNGA AKKKVAKATA
KSKNLKAPKE EALSDGDNFR DSPGDCKKSK KHPKTEVVDK DSDEHEDSED DWEESVLPVK
AVEIEIETPE QAKARKRSEK IKMELETYLR RMLKRFNKEV QENMHKVHLL CLLASGFYQN
SICRQPDLLA IGLSIIPTRF TKVPLQDRDI CFLSNLVKWF IGTFTVNADL SATEQDSLQT
TLEKRIAIYS ARDEEELVHI FLLILRALQL LTRLVLSLQP VPLNNVPESH KRPKTSKRIK
QEEIFPECSD KANARGKRSK ATAGSRQRRK PSCSEGEEAK QETXSHARAR QRRRVAAKXS
YKEESGSDEA GSGSDFELSS GESQHSSDED CEPGPQKQKR APVPQKTKTR SKSASKTQCE
PPSFPAASSS SSGSKRGRKV SSGGEETRDR KAAGVDQWLE VFCEPQAKWV CVDCVHGVVG
QPLTCYKYAT KPTTYVVGID NDGWVRDVTQ RYDPAWMTAT RKCRVDAEWW AETLRPYQSP
LTEREKKEDL EFQAKHLDQP LPTSXGTYKN HPLYALKRHL LKFQAIYPET AAVLGYCRGE
AVYS
//
