ID A0A1A6HAG8_NEOLE Unreviewed; 318 AA.
AC A0A1A6HAG8;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=C1q domain-containing protein {ECO:0000259|PROSITE:PS50871};
GN ORFNames=A6R68_14849 {ECO:0000313|EMBL:OBS74607.1};
OS Neotoma lepida (Desert woodrat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC Cricetidae; Neotominae; Neotoma.
OX NCBI_TaxID=56216 {ECO:0000313|EMBL:OBS74607.1, ECO:0000313|Proteomes:UP000092124};
RN [1] {ECO:0000313|EMBL:OBS74607.1, ECO:0000313|Proteomes:UP000092124}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=417 {ECO:0000313|EMBL:OBS74607.1};
RC TISSUE=Liver {ECO:0000313|EMBL:OBS74607.1};
RA Campbell M., Oakeson K.F., Yandell M., Halpert J.R., Dearing D.;
RT "The Draft Genome Sequence and Annotation of the Desert Woodrat Neotoma
RT lepida.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBS74607.1}.
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DR EMBL; LZPO01044409; OBS74607.1; -; Genomic_DNA.
DR STRING; 56216.A0A1A6HAG8; -.
DR Proteomes; UP000092124; Unassembled WGS sequence.
DR GO; GO:0005576; C:extracellular region; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.40; -; 1.
DR InterPro; IPR001073; C1q_dom.
DR InterPro; IPR008160; Collagen.
DR InterPro; IPR008983; Tumour_necrosis_fac-like_dom.
DR PANTHER; PTHR15427:SF33; EMI DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR15427; EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER; 1.
DR Pfam; PF00386; C1q; 1.
DR Pfam; PF01391; Collagen; 3.
DR PRINTS; PR00007; COMPLEMNTC1Q.
DR SMART; SM00110; C1Q; 1.
DR SUPFAM; SSF49842; TNF-like; 1.
DR PROSITE; PS50871; C1Q; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000092124};
KW Secreted {ECO:0000256|ARBA:ARBA00022525};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 182..318
FT /note="C1q"
FT /evidence="ECO:0000259|PROSITE:PS50871"
FT REGION 23..179
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 165..179
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 318 AA; 33327 MW; 4B075D317323A656 CRC64;
MLWKLVLLPE CFDTSQEKLK RNDCKMQPMA ELQHAPXRAE GEPGHPGGPG KDGIRGEKGE
PGAXGRVEAK GIKGDPGSRG SPGKHGPKGS IGPTGEQGPP GETGPQGQKG DKGDVGPTGP
EGLMGSTGPL GPKGLPGPVG PIGKPGPKGE AGPMGPQGEP GVRGIRGWKG DRGEKGKVGE
APILPKSAFT VGLTVISKFP PPDVPIKFDK ILYNELNHYN VATGKFTCHV AGVYYFTYHI
TVFSRNVQVS LVKNGVKVLH TKDGYMSSED QASGGVVLEL KLGDEVWMQV TGGERFNGLF
ADEDDDTTFT GFLLFSSS
//
