ID A0A1A6HD96_NEOLE Unreviewed; 500 AA.
AC A0A1A6HD96;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=PHD-type domain-containing protein {ECO:0000259|PROSITE:PS51805};
DE Flags: Fragment;
GN ORFNames=A6R68_17936 {ECO:0000313|EMBL:OBS75612.1};
OS Neotoma lepida (Desert woodrat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC Cricetidae; Neotominae; Neotoma.
OX NCBI_TaxID=56216 {ECO:0000313|EMBL:OBS75612.1, ECO:0000313|Proteomes:UP000092124};
RN [1] {ECO:0000313|EMBL:OBS75612.1, ECO:0000313|Proteomes:UP000092124}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=417 {ECO:0000313|EMBL:OBS75612.1};
RC TISSUE=Liver {ECO:0000313|EMBL:OBS75612.1};
RA Campbell M., Oakeson K.F., Yandell M., Halpert J.R., Dearing D.;
RT "The Draft Genome Sequence and Annotation of the Desert Woodrat Neotoma
RT lepida.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBS75612.1}.
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DR EMBL; LZPO01036172; OBS75612.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1A6HD96; -.
DR STRING; 56216.A0A1A6HD96; -.
DR Proteomes; UP000092124; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR CDD; cd15496; PHD_PHF7_G2E3_like; 1.
DR Gene3D; 3.90.1750.10; Hect, E3 ligase catalytic domains; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR034732; EPHD.
DR InterPro; IPR035983; Hect_E3_ubiquitin_ligase.
DR InterPro; IPR042012; PHF7/G2E3_PHD.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR12420:SF37; G2_M PHASE-SPECIFIC E3 UBIQUITIN-PROTEIN LIGASE; 1.
DR PANTHER; PTHR12420; PHD FINGER PROTEIN; 1.
DR Pfam; PF13771; zf-HC5HC2H; 1.
DR SMART; SM00249; PHD; 3.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR SUPFAM; SSF56204; Hect, E3 ligase catalytic domain; 1.
DR PROSITE; PS51805; EPHD; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000092124};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 1..92
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS51805"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:OBS75612.1"
FT NON_TER 500
FT /evidence="ECO:0000313|EMBL:OBS75612.1"
SQ SEQUENCE 500 AA; 57062 MW; FCA63464236836F9 CRC64;
LMSSGIWQRG KEEEGVYGFL VEDIRKEVNR ASKLKCAVCK KNGASIGCVV PQCKRSYHLP
CGMQKESFCW KHRPVQAITS KYRDSLPCTI CLECIEPIPT YNTLQSPCCK NAWFHRDCLQ
VQAINAGVYF FRCTLCNNTD IFQKEMLRMG IHIPEKDASW ELEENAYQEL LQSHDRCDVR
RCHCKEGREY NEPNSKWEVK RCQCCGSSGT HVACSSLQSC EQNWECLECR RISYNPDFRR
APKHPLANST NVTVTDCLLE ESSPKLPRQS AGAQHKELLR QGNKFREDIS KILVELGVQI
KKKAKRLYIN KANVWKSALK QFQSQKFNPA YTIEVVYVNE NDNFGREHPG SKQEFLGHLM
QHLETSSLFE GSLSKNLTLN SQALKENLYY EAGRMLAISL VHGGPAPGFF SKTLFNCLAY
GPENTLPILD DVSDFDVAQI IIKINAAANL NSLNSVINEC YSYLELIGCL RLITTLSDKY
MLVKDILFYH VIKRVQAPFE
//
