ID   A0A1A6HEX8_NEOLE        Unreviewed;       480 AA.
AC   A0A1A6HEX8;
DT   05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT   05-OCT-2016, sequence version 1.
DT   27-MAR-2024, entry version 29.
DE   RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
DE   Flags: Fragment;
GN   ORFNames=A6R68_17364 {ECO:0000313|EMBL:OBS76187.1};
OS   Neotoma lepida (Desert woodrat).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC   Cricetidae; Neotominae; Neotoma.
OX   NCBI_TaxID=56216 {ECO:0000313|EMBL:OBS76187.1, ECO:0000313|Proteomes:UP000092124};
RN   [1] {ECO:0000313|EMBL:OBS76187.1, ECO:0000313|Proteomes:UP000092124}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=417 {ECO:0000313|EMBL:OBS76187.1};
RC   TISSUE=Liver {ECO:0000313|EMBL:OBS76187.1};
RA   Campbell M., Oakeson K.F., Yandell M., Halpert J.R., Dearing D.;
RT   "The Draft Genome Sequence and Annotation of the Desert Woodrat Neotoma
RT   lepida.";
RL   Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the RRM CPEB family.
CC       {ECO:0000256|ARBA:ARBA00010347}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OBS76187.1}.
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DR   EMBL; LZPO01034974; OBS76187.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1A6HEX8; -.
DR   STRING; 56216.A0A1A6HEX8; -.
DR   Proteomes; UP000092124; Unassembled WGS sequence.
DR   GO; GO:0003730; F:mRNA 3'-UTR binding; IEA:InterPro.
DR   GO; GO:0045182; F:translation regulator activity; IEA:InterPro.
DR   CDD; cd12723; RRM1_CPEB1; 1.
DR   CDD; cd12725; RRM2_CPEB1; 1.
DR   Gene3D; 3.30.70.330; -; 2.
DR   Gene3D; 4.10.640.40; Cytoplasmic polyadenylation element-binding protein, ZZ domain; 1.
DR   InterPro; IPR032292; CEBP1_N.
DR   InterPro; IPR032296; CEBP_ZZ.
DR   InterPro; IPR038446; CEBP_ZZ_sf.
DR   InterPro; IPR034819; CPEB.
DR   InterPro; IPR034977; CPEB1_RRM1.
DR   InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR   InterPro; IPR035979; RBD_domain_sf.
DR   InterPro; IPR000504; RRM_dom.
DR   PANTHER; PTHR12566; CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB; 1.
DR   PANTHER; PTHR12566:SF9; CYTOPLASMIC POLYADENYLATION ELEMENT-BINDING PROTEIN 1; 1.
DR   Pfam; PF16368; CEBP1_N; 1.
DR   Pfam; PF16366; CEBP_ZZ; 1.
DR   Pfam; PF16367; RRM_7; 1.
DR   SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR   PROSITE; PS50102; RRM; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000092124};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW   ProRule:PRU00176}; Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL          1..21
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           22..480
FT                   /note="RRM domain-containing protein"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5008346340"
FT   DOMAIN          337..418
FT                   /note="RRM"
FT                   /evidence="ECO:0000259|PROSITE:PS50102"
FT   REGION          93..127
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          145..187
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        106..127
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        173..187
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         480
FT                   /evidence="ECO:0000313|EMBL:OBS76187.1"
SQ   SEQUENCE   480 AA;  52380 MW;  D7E55E52AB012F1C CRC64;
     MMRFSITRLC RLMSLAAGSI SSPITCYLVC NADGIGDLSK RSAHTGDEHL LSQAVLELAL
     LSMLQNPLGN VLGKTPLSFL SLDPLGSDLD KFPAPSVRGS RLDTRPILDS RSSSPSDSDT
     SGFSSGSDHL SDLISSLRIS PPLPFLSMTG NGSRDPLKMG VGSRMDQEQA ALAAVTPSPT
     SASKRWPGAS VWPSWDLPEA PKDPFSIERE ARLHRQAAAV NEATCTWSGQ LPPRNYKNPI
     YSCKVFLGGV PWDITEAGLV NTFRVFGSLS VEWPGKDGKH PRCPPKGYVY LVFELEKSVR
     ALLQACSHDP MSPDGLSEYY FKINFVWSPS QRLDPSRTVF VGALHGMLNA EALAAILNDL
     FGGVVYAGID TDKHKYPIGS GRVTFNNQRS YLKAVSAAFV EIKTTKFTKK VQIDPYLEDS
     LCLICSSQPG PFFCRDQLLA LATQLGRPAP PQPPDEEPEE LRFQLEKLAL PSGLYCPSWQ
//