ID A0A1A6HEY2_NEOLE Unreviewed; 88 AA.
AC A0A1A6HEY2;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 17.
DE RecName: Full=Sm domain-containing protein {ECO:0000259|PROSITE:PS52002};
DE Flags: Fragment;
GN ORFNames=A6R68_16405 {ECO:0000313|EMBL:OBS77143.1};
OS Neotoma lepida (Desert woodrat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC Cricetidae; Neotominae; Neotoma.
OX NCBI_TaxID=56216 {ECO:0000313|EMBL:OBS77143.1, ECO:0000313|Proteomes:UP000092124};
RN [1] {ECO:0000313|EMBL:OBS77143.1, ECO:0000313|Proteomes:UP000092124}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=417 {ECO:0000313|EMBL:OBS77143.1};
RC TISSUE=Liver {ECO:0000313|EMBL:OBS77143.1};
RA Campbell M., Oakeson K.F., Yandell M., Halpert J.R., Dearing D.;
RT "The Draft Genome Sequence and Annotation of the Desert Woodrat Neotoma
RT lepida.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the snRNP SmB/SmN family.
CC {ECO:0000256|ARBA:ARBA00009123}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBS77143.1}.
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DR EMBL; LZPO01034679; OBS77143.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1A6HEY2; -.
DR STRING; 56216.A0A1A6HEY2; -.
DR Proteomes; UP000092124; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR CDD; cd01717; Sm_B; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR047575; Sm.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR PANTHER; PTHR10701:SF0; SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B; 1.
DR PANTHER; PTHR10701; SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N; 1.
DR Pfam; PF01423; LSM; 1.
DR SMART; SM00651; Sm; 1.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR PROSITE; PS52002; SM; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000092124};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274}.
FT DOMAIN 3..85
FT /note="Sm"
FT /evidence="ECO:0000259|PROSITE:PS52002"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:OBS77143.1"
FT NON_TER 88
FT /evidence="ECO:0000313|EMBL:OBS77143.1"
SQ SEQUENCE 88 AA; 10173 MW; A82851B8A6471645 CRC64;
TVGKSSKMLQ HIDYRMRCIL QDGRIFIGTF KAFDKHMNLI LCDCDEFRKI KPKNAKQPER
EEKRVLGLVL LRGENLVSMT VEGPPPKD
//
