ID A0A1A6HN47_NEOLE Unreviewed; 368 AA.
AC A0A1A6HN47;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 24-JAN-2024, entry version 17.
DE RecName: Full=Nucleoporin NSP1-like C-terminal domain-containing protein {ECO:0000259|Pfam:PF05064};
DE Flags: Fragment;
GN ORFNames=A6R68_18476 {ECO:0000313|EMBL:OBS79152.1};
OS Neotoma lepida (Desert woodrat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC Cricetidae; Neotominae; Neotoma.
OX NCBI_TaxID=56216 {ECO:0000313|EMBL:OBS79152.1, ECO:0000313|Proteomes:UP000092124};
RN [1] {ECO:0000313|EMBL:OBS79152.1, ECO:0000313|Proteomes:UP000092124}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=417 {ECO:0000313|EMBL:OBS79152.1};
RC TISSUE=Liver {ECO:0000313|EMBL:OBS79152.1};
RA Campbell M., Oakeson K.F., Yandell M., Halpert J.R., Dearing D.;
RT "The Draft Genome Sequence and Annotation of the Desert Woodrat Neotoma
RT lepida.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the nucleoporin NSP1/NUP62 family.
CC {ECO:0000256|ARBA:ARBA00005911}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBS79152.1}.
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DR EMBL; LZPO01027364; OBS79152.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1A6HN47; -.
DR STRING; 56216.A0A1A6HN47; -.
DR Proteomes; UP000092124; Unassembled WGS sequence.
DR GO; GO:0005643; C:nuclear pore; IEA:InterPro.
DR GO; GO:0017056; F:structural constituent of nuclear pore; IEA:InterPro.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR Gene3D; 1.20.5.170; -; 1.
DR InterPro; IPR026010; NSP1/NUP62.
DR InterPro; IPR007758; Nucleoporin_NSP1_C.
DR PANTHER; PTHR12084; NUCLEAR PORE GLYCOPROTEIN P62-RELATED; 1.
DR PANTHER; PTHR12084:SF13; NUCLEOPORIN 62 C-TERMINAL-LIKE; 1.
DR Pfam; PF05064; Nsp1_C; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000092124};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 150..257
FT /note="Nucleoporin NSP1-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF05064"
FT COILED 211..238
FT /evidence="ECO:0000256|SAM:Coils"
FT NON_TER 368
FT /evidence="ECO:0000313|EMBL:OBS79152.1"
SQ SEQUENCE 368 AA; 42022 MW; D09A14A384FFCB4B CRC64;
MPPEIQETRI GSLMFTFMSL ESQLLKDGTD YKCIRSRQLS FLGVNGVLII RDRDAEVVPS
APNTPDLWGA CGMWRLGMRK EAGGPHNEAN IQAVNAIQML ATTSTTTTTT VTTNTTTTIT
SGFNLYFKPP ASPWVNDTGL ISVASLPVTM TVNSIITPVM TYGHLGSMVD KWNCQLQEQE
KHFLYQANRV NVWNHTLIES RDEITFLHYE VEKVKLDQSR LERELDFILA QQKELEHLLT
PLEEFVKEQN GPFNLLYVDK EYERIYKLAE HIDAELKRMS QDLKDIIVHL NSHGSLDDAP
EPLQQICKLL NAHMDSLQWI SQNSVNSTFG VELKEVSQGI MQKKVEEVTK AFEEYRRKEQ
ECSMKFAF
//
