ID A0A1A9EZ69_9GAMM Unreviewed; 637 AA.
AC A0A1A9EZ69;
DT 05-OCT-2016, integrated into UniProtKB/TrEMBL.
DT 05-OCT-2016, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Sigma-54-dependent Fis family transcriptional regulator {ECO:0000313|EMBL:ANG62951.1};
GN ORFNames=A8C75_10955 {ECO:0000313|EMBL:ANG62951.1};
OS Marinobacterium aestuarii.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae; Marinobacterium.
OX NCBI_TaxID=1821621 {ECO:0000313|EMBL:ANG62951.1, ECO:0000313|Proteomes:UP000078070};
RN [1] {ECO:0000313|Proteomes:UP000078070}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ST58-10 {ECO:0000313|Proteomes:UP000078070};
RA Baek K., Yang S.-J.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ANG62951.1, ECO:0000313|Proteomes:UP000078070}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ST58-10 {ECO:0000313|EMBL:ANG62951.1,
RC ECO:0000313|Proteomes:UP000078070};
RX PubMed=29303694; DOI=10.1099/ijsem.0.002561;
RA Bae S.S., Jung J., Chung D., Baek K.;
RT "Marinobacterium aestuarii sp. nov., a benzene-degrading marine bacterium
RT isolated from estuary sediment.";
RL Int. J. Syst. Evol. Microbiol. 68:651-656(2018).
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DR EMBL; CP015839; ANG62951.1; -; Genomic_DNA.
DR RefSeq; WP_067381972.1; NZ_CP015839.1.
DR AlphaFoldDB; A0A1A9EZ69; -.
DR STRING; 1821621.A8C75_10955; -.
DR KEGG; mars:A8C75_10955; -.
DR OrthoDB; 9804019at2; -.
DR Proteomes; UP000078070; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF77; TRANSCRIPTIONAL REGULATORY PROTEIN GLRR; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000078070};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 223..274
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 337..562
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
FT DOMAIN 605..637
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 637 AA; 68879 MW; A88A6EF23B278BA6 CRC64;
MHPKLHPTLV DDPQQGIRIA RNRLLECGEV PSGLLRDEIE ASWRRSVGAG LSLRGPFDAD
TRVAGLRELL DAHQDLIQLA APEMEQLSRQ VGDSGVVVLA NADATILTTE GCREKSLRER
FGLVPGACWS EQARGTNGLG TAIVDARPTL VNCSEHFLDS VTHFSCISAP ICSADGRVVA
VLDMTREGQL IQPQDSLGIV QLAAQSIENR LFVSASPDVL LLSFHSRRQY LGSVWHGLLA
ISLDGRIKAL NEQACQLLGA SRTRLVGRAV EEVLGEPLET LLALRLRDGV GSLQSRAGEL
FCEMLQFPRA LPRLLPGLRQ PAFNRTPASR PADLSHLAGG DARLARALRI GPRALMADVP
ILLNGETGTG KEVIARALHA HSARAAKPFV AVNCAAIPEG LIESELFGYR EGAFTGSRKG
GMVGRFQQAN GGTLFLDEIG DMPVALQARL LRVLQERCVA PLGGGEEVRL DIALICATHH
DLKQRVRDGE FREDLFYRLN GVGVRLPALR ERSDLDALTA QLLSGLGAAG VTLDSEVQEL
FSGYGWPGNI RQLEMVLRTA VALLEPGERC IGTDHLSDDF LDDLLAPRCS AAGSLKENEL
VQIREVLARH QGNISAAAAT LGISRATLYR KLKQLEE
//
