ID A0A1B1Y6F2_9FLAO Unreviewed; 519 AA.
AC A0A1B1Y6F2;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE RecName: Full=Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335};
DE Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};
DE EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};
GN Name=rny {ECO:0000256|HAMAP-Rule:MF_00335};
GN ORFNames=AXE80_08520 {ECO:0000313|EMBL:ANW96318.1};
OS Wenyingzhuangia fucanilytica.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Wenyingzhuangia.
OX NCBI_TaxID=1790137 {ECO:0000313|EMBL:ANW96318.1, ECO:0000313|Proteomes:UP000092967};
RN [1] {ECO:0000313|EMBL:ANW96318.1, ECO:0000313|Proteomes:UP000092967}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CZ1127 {ECO:0000313|EMBL:ANW96318.1,
RC ECO:0000313|Proteomes:UP000092967};
RA Wen L., He K., Yang H.;
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Endoribonuclease that initiates mRNA decay.
CC {ECO:0000256|HAMAP-Rule:MF_00335}.
CC -!- SIMILARITY: Belongs to the RNase Y family. {ECO:0000256|HAMAP-
CC Rule:MF_00335}.
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DR EMBL; CP014224; ANW96318.1; -; Genomic_DNA.
DR RefSeq; WP_068826317.1; NZ_CP014224.1.
DR AlphaFoldDB; A0A1B1Y6F2; -.
DR STRING; 1790137.AXE80_08520; -.
DR KEGG; wfu:AXE80_08520; -.
DR OrthoDB; 9803205at2; -.
DR Proteomes; UP000092967; Chromosome.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-UniRule.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004521; F:RNA endonuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006402; P:mRNA catabolic process; IEA:UniProtKB-UniRule.
DR CDD; cd00077; HDc; 1.
DR CDD; cd22431; KH-I_RNaseY; 1.
DR Gene3D; 1.10.3210.10; Hypothetical protein af1432; 1.
DR Gene3D; 3.30.1370.10; K Homology domain, type 1; 1.
DR HAMAP; MF_00335; RNase_Y; 1.
DR InterPro; IPR003607; HD/PDEase_dom.
DR InterPro; IPR006674; HD_domain.
DR InterPro; IPR006675; HDIG_dom.
DR InterPro; IPR004087; KH_dom.
DR InterPro; IPR004088; KH_dom_type_1.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR InterPro; IPR017705; Ribonuclease_Y.
DR InterPro; IPR022711; RNase_Y_N.
DR NCBIfam; TIGR00277; HDIG; 1.
DR NCBIfam; TIGR03319; RNase_Y; 1.
DR PANTHER; PTHR12826; RIBONUCLEASE Y; 1.
DR PANTHER; PTHR12826:SF15; RIBONUCLEASE Y; 1.
DR Pfam; PF01966; HD; 1.
DR Pfam; PF00013; KH_1; 1.
DR Pfam; PF12072; RNase_Y_N; 1.
DR SMART; SM00471; HDc; 1.
DR SMART; SM00322; KH; 1.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 1.
DR SUPFAM; SSF109604; HD-domain/PDEase-like; 1.
DR PROSITE; PS51831; HD; 1.
DR PROSITE; PS50084; KH_TYPE_1; 1.
PE 3: Inferred from homology;
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759, ECO:0000256|HAMAP-
KW Rule:MF_00335};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|HAMAP-Rule:MF_00335};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722, ECO:0000256|HAMAP-Rule:MF_00335};
KW Reference proteome {ECO:0000313|Proteomes:UP000092967};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|HAMAP-
KW Rule:MF_00335}.
FT DOMAIN 335..428
FT /note="HD"
FT /evidence="ECO:0000259|PROSITE:PS51831"
FT REGION 87..108
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 519 AA; 58032 MW; 4B20C3F30B82B081 CRC64;
MNTTIILVAV AALVVGFVIA KMLEKFKVSQ LTVQAEKEAA SIVKEAKLTA EAVKKDKILQ
AKEKFIELKT EHEKVILNRE KKVSESEKRA KDKETSLNKE IEREKKLNKS LEDKESDYNY
RLEFLEKKQA ELDKMHKKQV DILESISGLS ADEAKVQLVD SLKAEAKTDA MAYIRDTLEE
AKLTAEQDAR QLILNTIQRV GVEQSIENCV SVFNIESDDV KGRIIGREGR NIRAIEAATG
VEIIVDDTPE AIILSCFDPV RREIARLSMH KLVTDGRIHP ARIEEVVEKT EKQINQEIIE
VGKRTVIDLG IHGLHPELVK TIGRMKFRSS YGQNLLQHSR EVANLCGLMA AELGLNVKAA
KRAGLLHDIG KVPDTESELP HALLGMEWAE KYGEKPDVCN AIGAHHDEIE MKTMLAPIVQ
VCDAISGARP GARRQVLDSY IQRLKDLEDL AFGFTGVQKA YAIQAGRELR VLVESTKVTD
EQASDLSFNI SQKIQTEMTY PGQVKVTVIR ETRAVNVAK
//
