GenomeNet

Database: UniProt
Entry: A0A1B3ZBT4_9SPHN
LinkDB: A0A1B3ZBT4_9SPHN
Original site: A0A1B3ZBT4_9SPHN 
ID   A0A1B3ZBT4_9SPHN        Unreviewed;       653 AA.
AC   A0A1B3ZBT4;
DT   02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT   02-NOV-2016, sequence version 1.
DT   24-JAN-2024, entry version 22.
DE   SubName: Full=Cytochrome C biogenesis protein CcmF {ECO:0000313|EMBL:AOH84887.1};
GN   ORFNames=AWL63_13885 {ECO:0000313|EMBL:AOH84887.1};
OS   Sphingomonas panacis.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC   Sphingomonadaceae; Sphingomonas.
OX   NCBI_TaxID=1560345 {ECO:0000313|EMBL:AOH84887.1, ECO:0000313|Proteomes:UP000094256};
RN   [1] {ECO:0000313|EMBL:AOH84887.1, ECO:0000313|Proteomes:UP000094256}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DCY99 {ECO:0000313|EMBL:AOH84887.1,
RC   ECO:0000313|Proteomes:UP000094256};
RA   Kim Y.J., Yang D.C., Sing P.;
RT   "Complete genome and mega plasmid sequence of Sphingomonas panacis DCY99
RT   elicits systemic resistance in rice to Xanthomonas oryzae.";
RL   Submitted (JAN-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Required for the biogenesis of c-type cytochromes. Possible
CC       subunit of a heme lyase. {ECO:0000256|ARBA:ARBA00037230}.
CC   -!- SUBCELLULAR LOCATION: Cell inner membrane
CC       {ECO:0000256|ARBA:ARBA00004429}; Multi-pass membrane protein
CC       {ECO:0000256|ARBA:ARBA00004429}. Membrane
CC       {ECO:0000256|ARBA:ARBA00004141}; Multi-pass membrane protein
CC       {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the CcmF/CycK/Ccl1/NrfE/CcsA family.
CC       {ECO:0000256|ARBA:ARBA00009186}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP014168; AOH84887.1; -; Genomic_DNA.
DR   RefSeq; WP_069205439.1; NZ_CP014168.1.
DR   AlphaFoldDB; A0A1B3ZBT4; -.
DR   STRING; 1560345.AWL63_13885; -.
DR   KEGG; span:AWL63_13885; -.
DR   OrthoDB; 9761451at2; -.
DR   Proteomes; UP000094256; Chromosome.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0020037; F:heme binding; IEA:InterPro.
DR   GO; GO:0015232; F:heme transmembrane transporter activity; IEA:InterPro.
DR   GO; GO:0017004; P:cytochrome complex assembly; IEA:InterPro.
DR   InterPro; IPR032523; CcmF_C.
DR   InterPro; IPR002541; Cyt_c_assembly.
DR   InterPro; IPR003567; Cyt_c_biogenesis.
DR   InterPro; IPR003568; Cyt_c_biogenesis_CcmF.
DR   PANTHER; PTHR43653; CYTOCHROME C ASSEMBLY PROTEIN-RELATED; 1.
DR   PANTHER; PTHR43653:SF1; CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCMF; 1.
DR   Pfam; PF16327; CcmF_C; 1.
DR   Pfam; PF01578; Cytochrom_C_asm; 1.
DR   PRINTS; PR01410; CCBIOGENESIS.
DR   PRINTS; PR01411; CCMFBIOGNSIS.
PE   3: Inferred from homology;
KW   Cell inner membrane {ECO:0000256|ARBA:ARBA00022519};
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Cytochrome c-type biogenesis {ECO:0000256|ARBA:ARBA00022748};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        48..72
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        132..153
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        187..207
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        219..239
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        259..276
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        283..303
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        323..345
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        366..390
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        402..422
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        434..452
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        458..478
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        487..507
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        617..638
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          99..305
FT                   /note="Cytochrome c assembly protein"
FT                   /evidence="ECO:0000259|Pfam:PF01578"
FT   DOMAIN          325..636
FT                   /note="Cytochrome c-type biogenesis protein CcmF C-
FT                   terminal"
FT                   /evidence="ECO:0000259|Pfam:PF16327"
SQ   SEQUENCE   653 AA;  68718 MW;  52CF0CDDA9FAB393 CRC64;
     MIAEAGLAAL WLAAALAAMQ FVLAAIGVRR VLAAPDDESA LTTDLIGAVR PVAIVQGALA
     ALAMALLIAV FLRSDMSVLL VAENSHSEKP WLYKFAGAWG NHEGSMLLWV TILGLAGGAV
     AIFERSLARA TVTATLGAQA LIALGFYAFL LFASNPFARI DPAPADGQGL NPLLQDPGLA
     FHPPTLYIGY VGISVAFSFA VGALVARDVG PAFARAMRPW VLGAWIFLTL GITAGSYWAY
     YELGWGGWWF WDPVENASLM PWLAATALLH SVTVLATRDG LRAWTVMLAV VAFSMSMIGT
     FLVRSGILTS VHAFAVDPTR GSFILVLLVL YIGGALALFA TRVGTVRAGN TFDLVSREGA
     LVANNLLLSV ILGVVLIGTL YPIVAAGFGV QLSVGPPFFD KAAGPVALLL VVVMAAGPLL
     RWRRDGWRAL AARLAVPAAA CAIVLAAVLV VAGGVSLLPL LGLALAAGLG VASVAPLWGR
     NLIRTPLFTW GMVVAHLGIA VSLAGMASES AFTKQTLVAA RVGEPQQVGP YTVTLTGISP
     VIGPNWSALE AHLTARRGDS PAITLRPQSR FFTNPVTVTS ESAIATRWDG QLYTVLGQID
     GAGRVQLRLW WKPFVTLIWL GGALVALGGA LSLIGRLLRE RRARHRAEAE AWT
//
DBGET integrated database retrieval system