ID A0A1B5Z8T7_TRISU Unreviewed; 424 AA.
AC A0A1B5Z8T7;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE RecName: Full=RNase H type-1 domain-containing protein {ECO:0000259|PROSITE:PS50879};
DE Flags: Fragment;
GN ORFNames=TSUD_420820 {ECO:0000313|EMBL:GAU10524.1};
OS Trifolium subterraneum (Subterranean clover).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; Hologalegina; IRL clade; Trifolieae; Trifolium.
OX NCBI_TaxID=3900 {ECO:0000313|EMBL:GAU10524.1, ECO:0000313|Proteomes:UP000242715};
RN [1] {ECO:0000313|Proteomes:UP000242715}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Daliak {ECO:0000313|Proteomes:UP000242715};
RX PubMed=28928752; DOI=10.3389/fpls.2017.01463;
RA Kaur P., Appels R., Bayer P.E., Keeble-Gagnere G., Wang J., Hirakawa H.,
RA Shirasawa K., Vercoe P., Stefanova K., Durmic Z., Nichols P., Revell C.,
RA Isobe S.N., Edwards D., Erskine W.;
RT "Climate Clever Clovers: New Paradigm to Reduce the Environmental Footprint
RT of Ruminants by Breeding Low Methanogenic Forages Utilizing Haplotype
RT Variation.";
RL Front. Plant Sci. 8:1463-1463(2017).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAU10524.1}.
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DR EMBL; BCLP01044678; GAU10524.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1B5Z8T7; -.
DR OrthoDB; 776674at2759; -.
DR Proteomes; UP000242715; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR041373; RT_RNaseH.
DR PANTHER; PTHR46387; POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN; 1.
DR PANTHER; PTHR46387:SF5; RNASE H DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF17917; RT_RNaseH; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000242715}.
FT DOMAIN 234..363
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
FT NON_TER 424
FT /evidence="ECO:0000313|EMBL:GAU10524.1"
SQ SEQUENCE 424 AA; 49137 MW; E2BB79DF4A0C11B6 CRC64;
MPAPKTEKQV RGFLGRLNYI SRFISHMTAT CGPIFKLLRK DQGITWTEDC QKAFDNIKEY
LLEPPILVPP VEGRPLIMYL TVLDDSMGCV LGQQDETGRK EHAIYYLSNK FTECESRYSM
LEKTCSALAW AAKRLRQYMI NHTTWLISKM DPIKYIFEKP ALTGRIARWQ MLLSEYDIEY
RTQKAIKGSI IADHLAHQPI DDYQSIKFDF PDEEIMYLKM KDCEEPLPEE GPNPESRWGL
IFDGAVNAYG NGIGVVIITP KGTHIPFSAR LLFDCTNNIA EYEACIMGIE EAIDLRIKVL
DIYGDSALVI NQIKGEWETR HQGLIPYKDY ARRLLTFFNK VELHHIPREE NQMVDALATL
SSMFEVSRWN DMPRISIRRL ERPAHVFAIE EVVDNKPWFH DIKQFLQSQE YPLGASNKDK
KTLR
//
