ID A0A1B6PK98_SORBI Unreviewed; 233 AA.
AC A0A1B6PK98;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=RIN4 pathogenic type III effector avirulence factor Avr cleavage site domain-containing protein {ECO:0000259|Pfam:PF05627};
GN ORFNames=SORBI_3006G049300 {ECO:0000313|EMBL:KXG26087.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:KXG26087.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:KXG26087.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000765; KXG26087.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1B6PK98; -.
DR STRING; 4558.A0A1B6PK98; -.
DR EnsemblPlants; KXG26087; KXG26087; SORBI_3006G049300.
DR Gramene; KXG26087; KXG26087; SORBI_3006G049300.
DR eggNOG; ENOG502STJS; Eukaryota.
DR InParanoid; A0A1B6PK98; -.
DR OMA; GEWDEGN; -.
DR OrthoDB; 384821at2759; -.
DR Proteomes; UP000000768; Chromosome 6.
DR GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR InterPro; IPR040387; RIN4/NOI4.
DR InterPro; IPR008700; TypeIII_avirulence_cleave.
DR PANTHER; PTHR33159:SF15; OS04G0379600 PROTEIN; 1.
DR PANTHER; PTHR33159; RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN; 1.
DR Pfam; PF05627; AvrRpt-cleavage; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 171..206
FT /note="RIN4 pathogenic type III effector avirulence factor
FT Avr cleavage site"
FT /evidence="ECO:0000259|Pfam:PF05627"
FT REGION 1..173
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 198..225
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 74..99
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 120..148
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 203..225
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 233 AA; 26239 MW; AB30106B0EBD41FC CRC64;
MAHPEIPAFG DWETTGNTPY TQKFEDARKN KKTGIPTQPN DPRRNPEHPR KSPLHPTTYK
TDPQDQGPRN PPHRPRPGTD HQRHSDRPTH REPAPRRQAN PQREQESNAG APRSPYRTAV
GSASPMQPNN QSKPKHRLTG MQTPERRPSS EGHGQHTPGR SRMKQGGYEP EEEVAVPPFG
EWDDANAASG EKYTGIFNRV RDDRLSPTSS ARQPSTTRSE ENKVQQKCSC CIL
//
