ID A0A1B6PMU0_SORBI Unreviewed; 885 AA.
AC A0A1B6PMU0;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=SORBI_3006G192600 {ECO:0000313|EMBL:KXG26994.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:KXG26994.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:KXG26994.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000765; KXG26994.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1B6PMU0; -.
DR EnsemblPlants; KXG26994; KXG26994; SORBI_3006G192600.
DR Gramene; KXG26994; KXG26994; SORBI_3006G192600.
DR eggNOG; KOG4197; Eukaryota.
DR InParanoid; A0A1B6PMU0; -.
DR OMA; ETFVSMH; -.
DR OrthoDB; 348565at2759; -.
DR Proteomes; UP000000768; Chromosome 6.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47928:SF17; OS03G0441400 PROTEIN; 1.
DR PANTHER; PTHR47928; REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 5.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 90..124
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 254..288
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 355..389
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 456..490
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 589..623
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 726..760
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 815..885
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 885 AA; 97535 MW; B806AF9B4CFF1236 CRC64;
MVASPWPPPP PSPPPAVASH MAVTQAFADA LRSCGARGAL AGARALHGRL VAVGLASAVF
LQNTLLHAYL SCGALPDARR LLLTDIAHPN VITHNVMLNG YVKLGRLSDA VELFGRMPAR
DVASWNTLMS GYFQSQQYLA SLESFVSMHR SGDSSPNAFT FAYAMKSCGA LGERSLALQL
LGMVQKFGSQ DDSDVAAALV DMFVRCGTVD LASRLFVRIK EPTIFCRNSM LVGYVKTYGV
DHALELFDSM PERDVVSWNM MVSALSQSGR VREALDMVVD MQSKGVRLDS TTYTSSLTAC
ARLSSLRWGK QLHAQVIRNL PCIDPYVASA LVELYAKCGC FKEAKGVFNS LHDRNNVAWT
VLIAGFLQHG CFTESVELFN QMRAELMTLD QFALATLISG CCSRMDLCLG RQLHSLCLKS
GQIQAVVVSN SLISMYAKCD NLQSAESIFR FMNEKDIVSW TSMITAHSQV GNIAKAREFF
DGMSTKNVIT WNAMLGAYIQ HGAEEDGLRM YNVMLSEKDV RPDWVTYVTL FKGCADLGAN
KLGDQIIGRT VKVGLILDTS VANAVITMYS KCGRILEARK VFDFLNVKDI VSWNAMITGY
SQHGMGKQAI EIFDDILKRG AKPDYISYVA VLSGCSHSGL VQEGKSYFDM MKRVHNISPG
LEHFSCMVDL LGRAGHLTEA KDLIDEMPMK PTAEVWGALL SACKIHGNNE LAELAAKHVF
ELDSPDSGSY MLMAKIYADA GKSDDSAQIR KLMRDKGIKK NPGYSWMEVN NKVHVFKADD
VSHPQVIAIR KKLDELMEKI ARLGYVRTDS PRSEIHHSEK LAVAFGLMSL PAWMPIHIMK
NLRICGDCHT VIKLISSVTG REFVIRDAVR FHHFNGGSCS CGDYW
//
