ID A0A1B6PRF1_SORBI Unreviewed; 849 AA.
AC A0A1B6PRF1;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE RecName: Full=C2H2-type domain-containing protein {ECO:0000259|PROSITE:PS50157};
GN ORFNames=SORBI_3005G100400 {ECO:0000313|EMBL:KXG28230.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:KXG28230.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:KXG28230.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000764; KXG28230.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1B6PRF1; -.
DR STRING; 4558.A0A1B6PRF1; -.
DR EnsemblPlants; KXG28230; KXG28230; SORBI_3005G100400.
DR Gramene; KXG28230; KXG28230; SORBI_3005G100400.
DR InParanoid; A0A1B6PRF1; -.
DR OMA; ATWGNHA; -.
DR OrthoDB; 442578at2759; -.
DR Proteomes; UP000000768; Chromosome 5.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 2.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR26374:SF443; OS05G0460900 PROTEIN; 1.
DR PANTHER; PTHR26374; ZINC FINGER PROTEIN ZAT5; 1.
DR Pfam; PF13912; zf-C2H2_6; 1.
DR SMART; SM00355; ZnF_C2H2; 3.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00042}; Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Zinc {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00042}.
FT DOMAIN 206..233
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 1..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 63..182
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 229..255
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 407..427
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 510..530
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 807..829
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..30
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 67..85
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 126..152
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 229..247
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 807..827
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 849 AA; 89148 MW; 14B12125A93B01E5 CRC64;
MDSNQKPLPS PPPLPPPPPP PPPPPKKGNT RGCPPLVSAR LHDGDTVGVG DTEAAALCRG
SPCVSHHELS GSGSHGLSRS SSHELSGSGR RVEGKAEAPI EQCGSPPQCS HEVARLGSSY
HELSGSSRHE LSRSGRHELS GSSHHELSES GHRLEGTTSS RSLVGYPGRD KPTAKQRGLP
RQHSHVVARF GLAGLGTVAT VDDQPYACAD CSMAFGQEMV LCGHMRSHKH DHLSSDSEED
APTSKRRKKQ NSKMRTVKPL DATWGNHALH NRFPRVAPTK VKKSGSESNV TIRNIVVTMH
DNNKVRENDS SGDDIPVIVM GSRGAPGLAP NAVAALSMAP APAVAVATPM PTPHPTAAFV
NTEATPAATS MAGMTIPRAP ASVAAVTITR APLATAMSAA TQTAPDLVKR NNGSGQATAH
SKYDSNGKVV ARNNNSCGKS LVGYGNIDYG EGVSGYSNGD YGGKGVAGCG SGSHTYSTST
TAGGESSKGC GKVYNCSKCK NRFFSTPQAL GGHTSSHHKI REKKGKAKLD SQSGLHKCKV
CKHVRRTAQE LSFHMKIVHP NHAVAAAASG KEKPFKATWT NNIDAALYGP YNTMGWQIPA
GAPRSAMLSL LASMAPVHQP PQGTMAMSGN PMTGHFSAAN TSTGWSLGTT SSILLATPLH
NQEQNPPEQI AVVDGHRSIN PAFFSFSRRQ ESAVVPGNAI ASSSSTPRPD NATAIDAPAN
TMSRRLPFFL TGRSAIHAPP VSMPVHQPTQ GMTAMAGNPV TGHFPAAMAG DWYSFPATTS
SVLPAIPLQT QAENPPQGRV VPANELEDTS QNEAENPPEQ TVPGNNGGRT IRLFGFNIAE
AWKEVKEPK
//
