ID A0A1B6Q7D5_SORBI Unreviewed; 583 AA.
AC A0A1B6Q7D5;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 07-JUN-2017, sequence version 2.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3003G377200 {ECO:0000313|EMBL:KXG33811.2};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:KXG33811.2, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:KXG33811.2, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
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DR EMBL; CM000762; KXG33811.2; -; Genomic_DNA.
DR AlphaFoldDB; A0A1B6Q7D5; -.
DR EnsemblPlants; KXG33811; KXG33811; SORBI_3003G377200.
DR Gramene; KXG33811; KXG33811; SORBI_3003G377200.
DR eggNOG; KOG4197; Eukaryota.
DR InParanoid; A0A1B6Q7D5; -.
DR OMA; AIHGQCK; -.
DR Proteomes; UP000000768; Chromosome 3.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 6.
DR Pfam; PF13041; PPR_2; 2.
DR SUPFAM; SSF48452; TPR-like; 2.
DR PROSITE; PS51375; PPR; 4.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 160..194
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 224..258
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 286..320
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 387..421
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 583 AA; 64627 MW; 9104A99081A8753B CRC64;
MVGQSPTANS RCHLGARARS SHPYYYAVRT KTPRTGSARM ASRARQLHAI YMTTSSHDPD
KWAHLVREYA SQSLLREAAL VYARNVPRRT HHQPLLPILL KAAATASPAE PGLGKSLHAE
ALKSAFARDL LVGTTIVSMY CKCGALADAR RAFDEMPDRN VISYNALLAG YAAAGDMDGA
LALFGGMRSW TYVTWATLIR GFAKKGDMAE ARRWFETTPP GMRTVVTWTV LVHGYVSAGD
MEAAREVFDR MPARNAFVWS SMVTGYFKAG NAEEAQAVFH RIPTRNLVNW NALIAGYAQI
GCSEKALEAF DSMLQERVKP DEFTMASLLS ACAQLGSLEQ GKKVHDFINR EHIRKNHFVL
NGLIDMYAKC GDLVYARYIF DGMRWKNTEC WNTMISALAS HGRSDEALHL FFQMEHSGQT
PNTITVLAVL GACTHGGFVD EGLRIFNKLD AYGVEAGVEH YGCLVDLLGR AGKLKEAYEI
VKNMPEEPNE VIWGSLLGAC RVHGDAEMSR LVTDEIHRLH SVHASSNDAE YIMLSNIMAA
SKRWEQAEQI RRKMARHGVE KTPACSSLEL GIPEYQVCAG SRQ
//