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Database: UniProt
Entry: A0A1B6Q7D5_SORBI
LinkDB: A0A1B6Q7D5_SORBI
Original site: A0A1B6Q7D5_SORBI 
ID   A0A1B6Q7D5_SORBI        Unreviewed;       583 AA.
AC   A0A1B6Q7D5;
DT   02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT   07-JUN-2017, sequence version 2.
DT   24-JAN-2024, entry version 28.
DE   RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=SORBI_3003G377200 {ECO:0000313|EMBL:KXG33811.2};
OS   Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX   NCBI_TaxID=4558 {ECO:0000313|EMBL:KXG33811.2, ECO:0000313|Proteomes:UP000000768};
RN   [1] {ECO:0000313|EMBL:KXG33811.2, ECO:0000313|Proteomes:UP000000768}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX   PubMed=19189423; DOI=10.1038/nature07723;
RA   Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA   Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA   Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA   Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA   Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA   Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA   Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA   Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT   "The Sorghum bicolor genome and the diversification of grasses.";
RL   Nature 457:551-556(2009).
RN   [2] {ECO:0000313|Proteomes:UP000000768}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX   PubMed=29161754; DOI=10.1111/tpj.13781;
RA   McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA   Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA   Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT   "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT   a transcriptome atlas, and signatures of genome organization.";
RL   Plant J. 93:338-354(2018).
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DR   EMBL; CM000762; KXG33811.2; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1B6Q7D5; -.
DR   EnsemblPlants; KXG33811; KXG33811; SORBI_3003G377200.
DR   Gramene; KXG33811; KXG33811; SORBI_3003G377200.
DR   eggNOG; KOG4197; Eukaryota.
DR   InParanoid; A0A1B6Q7D5; -.
DR   OMA; AIHGQCK; -.
DR   Proteomes; UP000000768; Chromosome 3.
DR   GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR   GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR   GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR   InterPro; IPR046848; E_motif.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR046960; PPR_At4g14850-like_plant.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 5.
DR   PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR   Pfam; PF20431; E_motif; 1.
DR   Pfam; PF01535; PPR; 6.
DR   Pfam; PF13041; PPR_2; 2.
DR   SUPFAM; SSF48452; TPR-like; 2.
DR   PROSITE; PS51375; PPR; 4.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737};
KW   Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT   REPEAT          160..194
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          224..258
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          286..320
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT   REPEAT          387..421
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   583 AA;  64627 MW;  9104A99081A8753B CRC64;
     MVGQSPTANS RCHLGARARS SHPYYYAVRT KTPRTGSARM ASRARQLHAI YMTTSSHDPD
     KWAHLVREYA SQSLLREAAL VYARNVPRRT HHQPLLPILL KAAATASPAE PGLGKSLHAE
     ALKSAFARDL LVGTTIVSMY CKCGALADAR RAFDEMPDRN VISYNALLAG YAAAGDMDGA
     LALFGGMRSW TYVTWATLIR GFAKKGDMAE ARRWFETTPP GMRTVVTWTV LVHGYVSAGD
     MEAAREVFDR MPARNAFVWS SMVTGYFKAG NAEEAQAVFH RIPTRNLVNW NALIAGYAQI
     GCSEKALEAF DSMLQERVKP DEFTMASLLS ACAQLGSLEQ GKKVHDFINR EHIRKNHFVL
     NGLIDMYAKC GDLVYARYIF DGMRWKNTEC WNTMISALAS HGRSDEALHL FFQMEHSGQT
     PNTITVLAVL GACTHGGFVD EGLRIFNKLD AYGVEAGVEH YGCLVDLLGR AGKLKEAYEI
     VKNMPEEPNE VIWGSLLGAC RVHGDAEMSR LVTDEIHRLH SVHASSNDAE YIMLSNIMAA
     SKRWEQAEQI RRKMARHGVE KTPACSSLEL GIPEYQVCAG SRQ
//
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