ID A0A1B6YR00_9RHOB Unreviewed; 553 AA.
AC A0A1B6YR00;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 24-JAN-2024, entry version 18.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=A8B83_11140 {ECO:0000313|EMBL:OAN71781.1};
OS Rhodobacteraceae bacterium EhC02.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Paracoccaceae.
OX NCBI_TaxID=1849170 {ECO:0000313|EMBL:OAN71781.1, ECO:0000313|Proteomes:UP000078223};
RN [1] {ECO:0000313|EMBL:OAN71781.1, ECO:0000313|Proteomes:UP000078223}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EhC02 {ECO:0000313|EMBL:OAN71781.1,
RC ECO:0000313|Proteomes:UP000078223};
RA Lavstsen T., Jespersen J.S.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAN71781.1}.
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DR EMBL; LXYH01000007; OAN71781.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1B6YR00; -.
DR STRING; 1849170.A8B83_11140; -.
DR Proteomes; UP000078223; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 5.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000078223};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:OAN71781.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 20..86
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 104..170
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 191..259
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 276..346
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 363..433
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 450..518
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 553 AA; 60753 MW; 29DA9611BF757A62 CRC64;
MEDFEALLNE SFEMDTPEEG SVVKGKVIAI EAGQAIIDVG YKMEGRVDLK EFTNPGEQPD
IKVGDEVEVF LRQVENARGE AVISREMARR EEAWDRLEKA YASEERVDGA IFGRVKGGFT
VDLGGAVAFL PGSQVDVRPV RDAGPLMGLK QPFQILKMDR RRGNIVVSRR AILEESRAEQ
RAEVIGNLTE GQTVDGVVKN ITEYGAFVDL GGVDGLLHVT DMAWRRVNHP SEILSIGETI
KVQVIKINKD THRISLGMKQ LQEDPWDLVA AKYPLGSVHS GRVTNITDYG AFVELEAGVE
GLVHVSEMSW TKKNVHPGKI VSTSQEVDVM VLEIDAAKRR VSLGLKQTQR NPWEVFAETH
PEGTEVEGEV KNITEFGLFI GLPGDIDGMV HLSDLSWDER GEDAIQNYRK GDMVHAVVSE
VDVEKERISL SIKALGGDKF AEAVGGVKRG SVITVAVTAI EDGGVEVEYE GMKSFIRRSD
LSRDRAEQRP ERFSVGDKVD VRVTNVDSKT RRLGLSIKAR EIAEEKEAVE QYGSSDSGAS
LGDILGAALK GDK
//
