ID A0A1B8ARE8_FUSPO Unreviewed; 1685 AA.
AC A0A1B8ARE8;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00012493};
DE EC=2.7.7.49 {ECO:0000256|ARBA:ARBA00012493};
GN ORFNames=FPOA_19946 {ECO:0000313|EMBL:OBS25218.1}, FPOA_20713
GN {ECO:0000313|EMBL:OBS25980.1}, FPOA_23654
GN {ECO:0000313|EMBL:OBS23057.1}, FPOA_26430
GN {ECO:0000313|EMBL:OBS17443.1}, FPOA_26985
GN {ECO:0000313|EMBL:OBS16899.1}, FPOA_28002
GN {ECO:0000313|EMBL:OBS15875.1}, FPOA_28059
GN {ECO:0000313|EMBL:OBS15825.1}, FPOA_28288
GN {ECO:0000313|EMBL:OBS15594.1};
OS Fusarium poae.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes;
OC Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium.
OX NCBI_TaxID=36050 {ECO:0000313|EMBL:OBS23057.1, ECO:0000313|Proteomes:UP000091967};
RN [1] {ECO:0000313|EMBL:OBS23057.1, ECO:0000313|Proteomes:UP000091967}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=2516 {ECO:0000313|EMBL:OBS23057.1,
RC ECO:0000313|Proteomes:UP000091967};
RA Vanheule A., Audenaert K., Warris S., Van De Geest H., Schijlen E.,
RA Hofte M., De Saeger S., Haesaert G., Waalwijk C., Van Der Lee T.;
RT "Living apart together: crosstalk between the core and supernumerary
RT genomes in a fungal plant pathogen.";
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBS23057.1}.
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DR EMBL; LYXU01000146; OBS15594.1; -; Genomic_DNA.
DR EMBL; LYXU01000130; OBS15825.1; -; Genomic_DNA.
DR EMBL; LYXU01000122; OBS15875.1; -; Genomic_DNA.
DR EMBL; LYXU01000056; OBS16899.1; -; Genomic_DNA.
DR EMBL; LYXU01000018; OBS17443.1; -; Genomic_DNA.
DR EMBL; LYXU01000003; OBS23057.1; -; Genomic_DNA.
DR EMBL; LYXU01000002; OBS25218.1; -; Genomic_DNA.
DR EMBL; LYXU01000002; OBS25980.1; -; Genomic_DNA.
DR STRING; 36050.A0A1B8ARE8; -.
DR OMA; NFEEMAT; -.
DR Proteomes; UP000091967; Unassembled WGS sequence.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.
DR GO; GO:1901363; F:heterocyclic compound binding; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006338; P:chromatin remodeling; IEA:UniProt.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:InterPro.
DR CDD; cd00024; CD_CSD; 1.
DR CDD; cd00303; retropepsin_like; 1.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 2.40.50.40; -; 1.
DR Gene3D; 3.10.20.370; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR001969; Aspartic_peptidase_AS.
DR InterPro; IPR016197; Chromo-like_dom_sf.
DR InterPro; IPR000953; Chromo/chromo_shadow_dom.
DR InterPro; IPR023780; Chromo_domain.
DR InterPro; IPR023779; Chromodomain_CS.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR005162; Retrotrans_gag_dom.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041373; RT_RNaseH.
DR InterPro; IPR001878; Znf_CCHC.
DR PANTHER; PTHR24559:SF425; RT_RNASEH DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF00385; Chromo; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF03732; Retrotrans_gag; 1.
DR Pfam; PF17917; RT_RNaseH; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SMART; SM00298; CHROMO; 1.
DR SUPFAM; SSF50630; Acid proteases; 1.
DR SUPFAM; SSF54160; Chromo domain-like; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS00141; ASP_PROTEASE; 1.
DR PROSITE; PS00598; CHROMO_1; 1.
DR PROSITE; PS50013; CHROMO_2; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50878; RT_POL; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Aspartyl protease {ECO:0000256|ARBA:ARBA00022750};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Mitochondrion {ECO:0000256|ARBA:ARBA00023128};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Protease {ECO:0000256|ARBA:ARBA00022750};
KW Reference proteome {ECO:0000313|Proteomes:UP000091967};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022918};
KW Transferase {ECO:0000256|ARBA:ARBA00022679};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 309..322
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 806..985
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 1318..1492
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT DOMAIN 1623..1682
FT /note="Chromo"
FT /evidence="ECO:0000259|PROSITE:PS50013"
FT REGION 1..21
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 239..305
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 375..533
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 658..710
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 251..295
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 375..412
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 444..507
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 675..700
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1685 AA; 196014 MW; A271196457988982 CRC64;
MSSNNTNNAP APPYTGPPPS TAEMMAELQL LRNTVRTLQA RVTELPAVAP PVNPVDNQRD
LGEVIKPTPP EPFKGKAADV IPFLTRMKGY FRLFPRKLDT AAKKMLYTAP LIQGDAKDWF
EPIWKDYLEN EYNQQDQETQ NIFADWLNFE ALLKDNFGVI NEERQAAAEI LALKQHGSCA
AHSAKFRQLA AKTEWDDEAL MEIYYRSLKE EVKDELYKAD RPDNLTEYIT MAVKIDERQY
ERRKEKSSAG RKGSNYNPYY PNQHNRRNQT TGPRNGSNQG GTQQNDTSYG SHSGPMTIGA
TRAYRPPTCW NCGRKGHKET DCYNPVKTNQ KYRPVPEGRN VRNTNLQENE AQMAIRTTRR
TNATTQVTRK NWQPVPEHPT MEQQGSRIAV TRRGKSAPDT GSTKQAPGSN LHDQKIGNIP
VRTTRPGSNL HYEDPNFVSA RQATKELDNE RAIEEWRQNT RRDPDRRDTP NPQELRLIEQ
ENARDNQLAS EHQEELSREH RCPHNEQWKR QQPAVLVEPQ HGDESRRVTT TPSRALRTTK
NGQRTCLELK VRIRGTWLTA LVDSGADVNA IDPRTVNRLK LPWKDKTHPY PMRNLEGQLF
DYEGGLITRE IDHLKMFVRT RRQNIDLDII PTPGHDLMLG YPWLQRYNPH VDWRTGQISG
YADPSDDEAA DSETDDELRS QTSTDTHGEE RREQRIHPPP NGVRHKQAQG RARRVRRTLA
SFGNQLRTLN ERLEQQPETT DRLRNVPEEY RIYDRLFKEE LDTKVPQHSR WDHEICLTSD
ELPFQKIYNL NEMELTTLKE YLEEELRKGN IRESSSAAGF PVMFVPKKNG KLRLVVDYRR
LNALTIKDRT PLPLITELKD RLQGKQVFTA LDLKGAYNLI RIKEGDEWKT AFRTKFGLFE
YLVMPFGLTN APATFQRMIN NVLRQYLDVF VVCYLDDILI FSDNDEEHKE HVHKVLKALQ
DANLLVEPEK SHFHVTEVDF LGHTISPGEI RMDRKKIAAV RDWPIPTTVK EVQSFLGFAN
YYRRFIRDFS KIANPLTELT KKDRKFVWIK DAQDAFERLR DAILEEPVLI MFDPTKEIEL
ETDSSDFALG GQIGQRDDNG KLHPIAFYSH KLHGAELNYP IYDKEFLAIV NCFKEFRHYL
MGSLHQIKVY TDHQNISHFA TTQELNRRQL RYAEYLCEFD FTIIHRKGSD NGRADAISRR
PDYDTGITKA KEQVLELNGK GEYQFTQPAR TIARTMRGTP DPGDHEDQEQ RKQTVREIHE
HPLHGHQGVT KTLKRLQSHY DWPNMRRLVE TVIKQCDVCM RTKSQRHKPY GTLQALPVAQ
RPWDSITMDF ITKLPLSEEP STGIFYDSIM VIVDRLTKFS YYLPYREATD AEELAYVFYR
HVVSIHGLPR EILSDRGPTF AAKFWQALMS HLGLNHRLTT AFRPQADGQT ERMNQVLEQY
LRCYINYEQN DWVEKLPVAQ LAYNTAYNES TRLTPAYANF GFTPDSYHAA RETPTINPAA
QIKAEDMKNL HEEMKKELEF VRKRMTKYYN TKRIERPTFK EGEMVYLSTK NITTKRPTHK
LDFKFIGPYK ILRKISENNY ELDLPPKVRI HPIFHISLLE SAADTIQVKI GNEPEEIDGP
ETYEAEAIRD MQKIDGKTMY LVKWKNYPEN ENTWEPPKHL INAQRLLKNF HQPQGRKNRE
RNSSQ
//