GenomeNet

Database: UniProt
Entry: A0A1B8F5X2_9PEZI
LinkDB: A0A1B8F5X2_9PEZI
Original site: A0A1B8F5X2_9PEZI 
ID   A0A1B8F5X2_9PEZI        Unreviewed;      1706 AA.
AC   A0A1B8F5X2;
DT   02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT   02-NOV-2016, sequence version 1.
DT   24-JAN-2024, entry version 30.
DE   RecName: Full=DNA-directed RNA polymerase subunit {ECO:0000256|RuleBase:RU004279};
DE            EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};
GN   ORFNames=VF21_02369 {ECO:0000313|EMBL:OBT78983.1};
OS   Pseudogymnoascus sp. 05NY08.
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC   Leotiomycetes incertae sedis; Pseudeurotiaceae; Pseudogymnoascus.
OX   NCBI_TaxID=1622149 {ECO:0000313|EMBL:OBT78983.1, ECO:0000313|Proteomes:UP000092096};
RN   [1] {ECO:0000313|EMBL:OBT78983.1, ECO:0000313|Proteomes:UP000092096}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=05NY08 {ECO:0000313|EMBL:OBT78983.1,
RC   ECO:0000313|Proteomes:UP000092096};
RA   Palmer J.M., Drees K.P., Foster J.T., Lindner D.L.;
RT   "Comparative genomics of Pseudogymnoascus destructans, the fungus causing
RT   white-nose syndrome of bats.";
RL   Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|Proteomes:UP000092096}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=05NY08 {ECO:0000313|Proteomes:UP000092096};
RX   PubMed=29295979; DOI=10.1038/s41467-017-02441-z;
RA   Palmer J.M., Drees K.P., Foster J.T., Lindner D.L.;
RT   "Extreme sensitivity to ultraviolet light in the fungal pathogen causing
RT   white-nose syndrome of bats.";
RL   Nat. Commun. 9:35-35(2018).
CC   -!- FUNCTION: DNA-dependent RNA polymerase catalyzes the transcription of
CC       DNA into RNA using the four ribonucleoside triphosphates as substrates.
CC       {ECO:0000256|RuleBase:RU004279}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550,
CC         ECO:0000256|RuleBase:RU004279};
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC       {ECO:0000256|RuleBase:RU004279}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KV458790; OBT78983.1; -; Genomic_DNA.
DR   STRING; 1622149.A0A1B8F5X2; -.
DR   OrthoDB; 169836at2759; -.
DR   Proteomes; UP000092096; Unassembled WGS sequence.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-EC.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR   CDD; cd02735; RNAP_I_Rpa1_C; 1.
DR   CDD; cd01435; RNAP_I_RPA1_N; 1.
DR   Gene3D; 1.10.132.30; -; 1.
DR   Gene3D; 1.10.150.390; -; 1.
DR   Gene3D; 1.10.357.120; -; 1.
DR   Gene3D; 2.40.40.20; -; 1.
DR   Gene3D; 3.30.70.2850; -; 1.
DR   Gene3D; 3.30.1490.180; RNA polymerase ii; 1.
DR   Gene3D; 4.10.860.120; RNA polymerase II, clamp domain; 1.
DR   Gene3D; 1.10.274.100; RNA polymerase Rpb1, domain 3; 1.
DR   InterPro; IPR047107; DNA-dir_RNA_pol1_lsu_C.
DR   InterPro; IPR015699; DNA-dir_RNA_pol1_lsu_N.
DR   InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR000722; RNA_pol_asu.
DR   InterPro; IPR006592; RNA_pol_N.
DR   InterPro; IPR007080; RNA_pol_Rpb1_1.
DR   InterPro; IPR007066; RNA_pol_Rpb1_3.
DR   InterPro; IPR042102; RNA_pol_Rpb1_3_sf.
DR   InterPro; IPR007083; RNA_pol_Rpb1_4.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR044893; RNA_pol_Rpb1_clamp_domain.
DR   InterPro; IPR038120; Rpb1_funnel_sf.
DR   PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR   PANTHER; PTHR19376:SF11; DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA1; 1.
DR   Pfam; PF04997; RNA_pol_Rpb1_1; 1.
DR   Pfam; PF00623; RNA_pol_Rpb1_2; 1.
DR   Pfam; PF04983; RNA_pol_Rpb1_3; 1.
DR   Pfam; PF05000; RNA_pol_Rpb1_4; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   SMART; SM00663; RPOLA_N; 1.
DR   SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE   3: Inferred from homology;
KW   DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW   ECO:0000256|RuleBase:RU004279};
KW   Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695,
KW   ECO:0000256|RuleBase:RU004279}; Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000092096};
KW   Transcription {ECO:0000256|ARBA:ARBA00023163,
KW   ECO:0000256|RuleBase:RU004279};
KW   Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|RuleBase:RU004279}.
FT   DOMAIN          370..698
FT                   /note="RNA polymerase N-terminal"
FT                   /evidence="ECO:0000259|SMART:SM00663"
FT   REGION          1369..1484
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1706 AA;  187385 MW;  F1FE9753DF605C35 CRC64;
     MNISQPVSSA IGSVDFAFLS QDEIKRLSVK AIQNPTTFDT LLNPVPGGLY DPALGAWGDI
     QCTTCHLGAL SCPGHVGHIT LPVPVYHPTF MDQLLRLLRA KCAYCHHFKM SRKDVNLYHC
     KLRLIQAGLL SAAEELDNID IVAKKAAAVE QEEESSDSGD DNGVESTIKQ RLIFVKKAIR
     DAKATPWDWK LEKNESVAEA RREVIKSFLK SITISKTCAN CRAISNGFRK DRFVKIFEKP
     MSAKEEAKNA QQNLKAVNAM RVVSKDASKK SNGYASDEGI ADIDLSSNEE DEGVGHTLDV
     AGGLVSKERS TSGTTAISKQ KPSTTGTERY VNPMEVRASL TLLFEKEQEI LSLVYASRSS
     SKKAAVITSE FFFLQTLLVP PNKYRPEART GAGEIAEAQQ NALYKQILTA GHMTAQISKE
     LDNPALADLK YRRRDFSDLQ ESWVKLQDSV NSLIDRDRNP IQGAAGKKNE DGIKQKLEKK
     EGLFRKNMMG KRVNFAARSV ISPDPNIETN EIGVPPVFAR KLTYPEPVTS HNFKELQQAV
     INGADKWPGA AAIENENGQV INLRTKTPDE RQSLANQLLA SSGVGANGAR NKKVYRHLTN
     GDVVLMNRQP TLHKPSIMGH RARVLPGEKT IRMHYANCNT YNADFDGDEM NMHFPQNEVA
     RAEALQIADT DHQYLAATAG KPLRGLIQDH ISVSVWMTNR DTFFDRATYQ QLVYNCLRPE
     SGHIIGERIE TVPPAIIKPF PQWTGKQIIT TILKNITPLG YTSLNLISKS QVPADRWGPK
     SEEGQVLFQD GELITGILDK SQLGPSGGGL IHSLHEAHGP TVAGKMLSIL GRLLTKFLHI
     RAFSCGMEDL LLTSEGEKIR REKLKDVHLI GLEVAAKYVT LEDRKPTAND PELRNRLEDV
     LRDDTKQEGL DVMMNGSSNK LSSEITKACL PHGLVKQFPK NQMQNMTVSG AKGSAVNANL
     ISCNLGQQVL EGRRVPVMVS GKSLPCFKPF ETNVRAGGYI ANRFLTGIRP QEYYFHAMAG
     REGLIDTAVK TSRSGYLQRC LIKGMEGLKV EYDTSVRDSD GSMVQFLYGE DGLDVTKTKH
     LTDFKFLLQN IESVVAQMKL GDDLEVIGEH QEKIQKMMKR GIKTAKANTI DVSDPVLAHY
     HPGRHLYSTS ESFNRSLNSY IKENPDGLIK SKSNPNAYSK KELGPILNVK YLKSVVEPGE
     AVGIVAGQSI GEPSTQMTLN TFHLAGHSAK NVTLGIPRLR EIVMTASNNI STPSMTLQVN
     EEMTEEAGQK FAKGISKLSL AEVLDEASVS ERIGKGTSQS RAKIYDINLK FFPPQEYRDT
     YAIDVADVIS TLEKKFVPKL QSLARKALGK KKGEKKLKSA ANTAAVPEIG KSVGVIEEAR
     PEGEKAPRDE DDDDEDDDGD ATNAKQKANR GQAVSYGAND DEDDAVQTQM EREASPEDED
     DGDDEGFQGG SRGSRLGNDE DYENDEEDTG AADQALSDDR QSRVMSKNAD VSRFRCDEGG
     SWCKVTLEYD ASSPKVLMLN ILESALHASL IQQISGLDTC TYVAGKGSDA AVVYASGVNL
     KAMQMYSDYI NPNKISTNDI AAMLEHYGVE ACRATIIQEL SGVFGGHGIA VDNRHLNLIA
     DFMTRGGGFS PFNRNGLKGS VSPFLKMSFE TTIGFLKDAV MDGDWDDLRS PSARIVIGRT
     SKVGTGAFDV LTKVPVDSDT DHVMSG
//
DBGET integrated database retrieval system