ID A0A1B8TXJ5_9FLAO Unreviewed; 984 AA.
AC A0A1B8TXJ5;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=DNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00012417};
DE EC=2.7.7.7 {ECO:0000256|ARBA:ARBA00012417};
GN ORFNames=LPB3_07500 {ECO:0000313|EMBL:OBY64229.1};
OS Polaribacter vadi.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae.
OX NCBI_TaxID=1774273 {ECO:0000313|EMBL:OBY64229.1, ECO:0000313|Proteomes:UP000092584};
RN [1] {ECO:0000313|Proteomes:UP000092584}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LPB0003 {ECO:0000313|Proteomes:UP000092584};
RA Shin S.-K., Yi H., Kim E.;
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a 2'-deoxyribonucleoside 5'-triphosphate + DNA(n) =
CC diphosphate + DNA(n+1); Xref=Rhea:RHEA:22508, Rhea:RHEA-COMP:17339,
CC Rhea:RHEA-COMP:17340, ChEBI:CHEBI:33019, ChEBI:CHEBI:61560,
CC ChEBI:CHEBI:173112; EC=2.7.7.7;
CC Evidence={ECO:0000256|ARBA:ARBA00024632};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBY64229.1}.
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DR EMBL; LSFM01000022; OBY64229.1; -; Genomic_DNA.
DR RefSeq; WP_065318979.1; NZ_LSFM01000022.1.
DR AlphaFoldDB; A0A1B8TXJ5; -.
DR STRING; 1774273.LPB03_04995; -.
DR KEGG; pob:LPB03_04995; -.
DR OrthoDB; 9803237at2; -.
DR Proteomes; UP000092584; Unassembled WGS sequence.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
DR GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR CDD; cd07431; PHP_PolIIIA; 1.
DR Gene3D; 1.10.150.870; -; 1.
DR Gene3D; 3.20.20.140; Metal-dependent hydrolases; 2.
DR InterPro; IPR011708; DNA_pol3_alpha_NTPase_dom.
DR InterPro; IPR040982; DNA_pol3_finger.
DR InterPro; IPR004805; DnaE2/DnaE/PolC.
DR InterPro; IPR029460; DNAPol_HHH.
DR InterPro; IPR004013; PHP_dom.
DR InterPro; IPR003141; Pol/His_phosphatase_N.
DR InterPro; IPR016195; Pol/histidinol_Pase-like.
DR NCBIfam; TIGR00594; polc; 1.
DR PANTHER; PTHR32294; DNA POLYMERASE III SUBUNIT ALPHA; 1.
DR Pfam; PF07733; DNA_pol3_alpha; 1.
DR Pfam; PF17657; DNA_pol3_finger; 1.
DR Pfam; PF14579; HHH_6; 1.
DR Pfam; PF02811; PHP; 1.
DR SMART; SM00481; POLIIIAc; 1.
DR SUPFAM; SSF89550; PHP domain-like; 1.
PE 4: Predicted;
KW DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW DNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00022932};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 1..68
FT /note="Polymerase/histidinol phosphatase N-terminal"
FT /evidence="ECO:0000259|SMART:SM00481"
SQ SEQUENCE 984 AA; 113040 MW; 7E49262BED5E84EC CRC64;
MYLNCHTYYS LRYGTFSETE LLQLALENNV HTLALTDINN TSACMNFVQQ AKKANIKPVV
GVDFRNGNTQ QFVALAKTNL GFQNINRFLS SFLESKTSIP EQPPFLEEVI IIYPFEKVLE
LNITNFKENE FIGISLAEVN KLRFSYLNEF TDKIVIQQQV TIRNKKDFNA HRILRAIDKN
TLLSKLEASE QCLETDKMYQ VDDLQNHFKD FPNAIKNTQV ILNQCNINFG FGKERTNQNL
QRYNNSFEED CKQLNQLCQS KIAKRYKEIT EEVNNRLQKE LKVIIDLKFV SFFLINYDII
QHANSNNFFH VGRGSGANSI VAYILGITDV DPIELDLYFE RFINPFRASP PDFDIDFSWK
DRDIMTQYIF DRFKNVALLA TYVTFKYKAV VRELGKVFGL PKEEIDKLSK GIVVGQLDEM
ANLVLKYGKL IEGFPNYVSV HAAGVLILDK PIHYYSATNL PPKNFPTVQF DMNIADDVGI
FKFDILGQRG LAKIKDALEI IKENNPDAPK IDITDVATFK KDKNINNLLK TGGAIGAYYV
ESPAMRGLMQ KLQTQDYLGL VAASSIIRPG VSSSGMKEEF IKRHRFPEKR KEANPILLKI
MPETYGVMVY QEDVMKVANQ FADLKLGEAD VLRRGMSGKY RSLKEFKAVE EKFIANCRKK
GHKDELIFKV WDQIKSFAGY AFAKGHSASY AVESYQSLFL KCYYPIEFMV AVLNNGGGFY
TAEHYIHEAK MCGAKIELPC INQSDHANRV KGKTIFLGFG YLKSLEQLTI QRILNERQLV
GTFSSLDDFL ERVRISIEQL SILIRMDAFR FTNKAKTTLL WEATFKLNVS KNRKNQQAAL
FRIQQKKFQI PELQSNWVEN FYDEIELLGF TIQNYFSLVI DEFHPHIKAK EMAQFPDQNV
LLYGQLVTTR FNQTSQGKLM RLSTFIDAEG NYFDAVHFTN VVHQYPINGM GVYACYGKIT
NRFGFCSMNI IQSKKMSIAT DPRS
//