ID A0A1B8U1C3_9FLAO Unreviewed; 603 AA.
AC A0A1B8U1C3;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=DEAD/DEAH box helicase {ECO:0000313|EMBL:OBY65642.1};
GN ORFNames=LPB301_08330 {ECO:0000313|EMBL:OBY65642.1};
OS Polaribacter reichenbachii.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae.
OX NCBI_TaxID=996801 {ECO:0000313|EMBL:OBY65642.1, ECO:0000313|Proteomes:UP000092612};
RN [1] {ECO:0000313|Proteomes:UP000092612}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KCTC 23969 {ECO:0000313|Proteomes:UP000092612};
RA Shin S.-K., Yi H.;
RT "Paenibacillus sp. LPB0068, isolated from Crassostrea gigas.";
RL Submitted (FEB-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC {ECO:0000256|RuleBase:RU000492}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBY65642.1}.
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DR EMBL; LSFL01000030; OBY65642.1; -; Genomic_DNA.
DR RefSeq; WP_068360087.1; NZ_VRMM01000008.1.
DR AlphaFoldDB; A0A1B8U1C3; -.
DR STRING; 996801.BW723_13450; -.
DR KEGG; prn:BW723_13450; -.
DR OrthoDB; 9785240at2; -.
DR Proteomes; UP000092612; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd12252; RRM_DbpA; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR005580; DbpA/CsdA_RNA-bd_dom.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR47959:SF13; ATP-DEPENDENT RNA HELICASE RHLE; 1.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR Pfam; PF03880; DbpA; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU000492};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000256|RuleBase:RU000492};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU000492};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU000492};
KW Reference proteome {ECO:0000313|Proteomes:UP000092612}.
FT DOMAIN 2..30
FT /note="DEAD-box RNA helicase Q"
FT /evidence="ECO:0000259|PROSITE:PS51195"
FT DOMAIN 34..205
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 216..377
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 515..603
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 2..30
FT /note="Q motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00552"
FT COMPBIAS 527..597
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 603 AA; 67672 MW; 8481F830C563BE4B CRC64;
MSTFLELGLK EPISKALIDL GYEKPTVIQE KAIPQIIAST DDLKAFAQTG TGKTAAFSLP
ILELLDENNS NVQAIILSPT RELAVQIGNN IKDFSKYQKN VKVTTVYGGS SMEEQIRSLK
KGSQIVVGTP GRTVDLINRR ALKLGNVQWL VLDEADEMLN MGFKEELDKV LEATPETKQT
LLFSATFPRE VEAIARNYMT KPVEVTSGEK NSGSENVEHE YYAVTERTRY PALKRIADLN
PDIYAIIFCR TRRETQEVAD NLIKDGYNAD SLHGDLSQAQ RDSVMGKFRK KTIQILVATD
VAARGLDVTE LTHVINHKLP DQIENYTHRS GRTGRAGNKG ISIVLVNGKE KGKLRVIERI
IKKKFVEGKV PTGKEIVQNQ LMNLIDKVQK TEVNESEINE FLPSIYDKLA DLDREELIQK
FVSLEFNSML AYYENAKDLN DLGRETSRKR STADNMTRFF INIGRKDSLN PAKLIGLIND
QEIGDKIEIG AIDILDTFSF FEIDKNFEDK TLEAFSSNQP DFDGRSVNVE ITKKERSGGG
RRGGKKPFGK KDGGFGRRRS SENSSRGSSD DGGRKRTDRR SSDRPKNSGD RKSGGFGRRR
RER
//
