ID A0A1B9NFP3_9MICO Unreviewed; 301 AA.
AC A0A1B9NFP3;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE SubName: Full=5'-3' exonuclease {ECO:0000313|EMBL:OCG75416.1};
GN ORFNames=A7J15_02810 {ECO:0000313|EMBL:OCG75416.1}, E3O41_08055
GN {ECO:0000313|EMBL:QBR75457.1};
OS Microbacterium sediminis.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Microbacterium.
OX NCBI_TaxID=904291 {ECO:0000313|EMBL:OCG75416.1, ECO:0000313|Proteomes:UP000093355};
RN [1] {ECO:0000313|EMBL:OCG75416.1, ECO:0000313|Proteomes:UP000093355}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YLB-01 {ECO:0000313|EMBL:OCG75416.1,
RC ECO:0000313|Proteomes:UP000093355};
RA Lavstsen T., Jespersen J.S.;
RL Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:QBR75457.1, ECO:0000313|Proteomes:UP000295661}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YLB-01 {ECO:0000313|EMBL:QBR75457.1,
RC ECO:0000313|Proteomes:UP000295661};
RA Yu L.;
RL Submitted (MAR-2019) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EMBL:QBR75457.1, ECO:0000313|Proteomes:UP000295661}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=YLB-01 {ECO:0000313|EMBL:QBR75457.1,
RC ECO:0000313|Proteomes:UP000295661};
RA Xu X.;
RT "Genomic analysis of Microbacterium sediminis YLB-01 reveals backgrounds
RT related to its deep sea enviroment adaptation.";
RL Submitted (APR-2019) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; LXMD01000013; OCG75416.1; -; Genomic_DNA.
DR EMBL; CP038256; QBR75457.1; -; Genomic_DNA.
DR RefSeq; WP_067024314.1; NZ_KV744781.1.
DR AlphaFoldDB; A0A1B9NFP3; -.
DR STRING; 904291.A7J15_02810; -.
DR KEGG; msed:E3O41_08055; -.
DR OrthoDB; 9806424at2; -.
DR Proteomes; UP000093355; Unassembled WGS sequence.
DR Proteomes; UP000295661; Chromosome.
DR GO; GO:0017108; F:5'-flap endonuclease activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
DR GO; GO:0033567; P:DNA replication, Okazaki fragment processing; IEA:InterPro.
DR CDD; cd09898; H3TH_53EXO; 1.
DR CDD; cd09859; PIN_53EXO; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR InterPro; IPR020046; 5-3_exonucl_a-hlix_arch_N.
DR InterPro; IPR002421; 5-3_exonuclease.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR020045; DNA_polI_H3TH.
DR InterPro; IPR038969; FEN.
DR InterPro; IPR008918; HhH2.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR PANTHER; PTHR42646:SF2; DNA-DIRECTED DNA POLYMERASE; 1.
DR PANTHER; PTHR42646; FLAP ENDONUCLEASE XNI; 1.
DR Pfam; PF01367; 5_3_exonuc; 1.
DR Pfam; PF02739; 5_3_exonuc_N; 1.
DR SMART; SM00475; 53EXOc; 1.
DR SMART; SM00279; HhH2; 1.
DR SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Exonuclease {ECO:0000313|EMBL:OCG75416.1};
KW Hydrolase {ECO:0000313|EMBL:OCG75416.1};
KW Nuclease {ECO:0000313|EMBL:OCG75416.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000093355}.
FT DOMAIN 1..270
FT /note="5'-3' exonuclease"
FT /evidence="ECO:0000259|SMART:SM00475"
SQ SEQUENCE 301 AA; 31607 MW; D9C1DCA67F45AF35 CRC64;
MLLDTASLYF RAYYGVPDTF RSPDGTVVNA ARGLLDMIAK LVTTYEPDRL VACWDDDWRP
QWRVDLIPSY KSHRVVELLE GAPDVEEVPD PLEAQVPIIR EALAALGVAV VGAAAHEADD
VIGTLATRAT GPVDVVTGDR DLFQLVDDAR GVRVIYTARG MSNLEIVTDD VVVAKYGVHA
AQYADFATLR GDASDGLPGV KGVGDKTAAT LLAAHGDLAG IRAAAEAGEG MSAGVRAKIA
AAADYLDVAP RVVAVARDLE LAPFDDAIGG FDADAARALA ERWGLAQPME RAIAALTAAA
G
//
