ID A0A1B9YSY0_9BRAD Unreviewed; 567 AA.
AC A0A1B9YSY0;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=LMTR3_01055 {ECO:0000313|EMBL:OCK57722.1};
OS Bradyrhizobium sp. LMTR 3.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Bradyrhizobium.
OX NCBI_TaxID=189873 {ECO:0000313|EMBL:OCK57722.1, ECO:0000313|Proteomes:UP000093220};
RN [1] {ECO:0000313|EMBL:OCK57722.1, ECO:0000313|Proteomes:UP000093220}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LMTR 3 {ECO:0000313|EMBL:OCK57722.1,
RC ECO:0000313|Proteomes:UP000093220};
RA Ormeno-Orrillo E., Duran D., Rey L., Ruiz Argueso T., Imperial J.,
RA Martinez E.;
RL Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OCK57722.1}.
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DR EMBL; MAXC01000023; OCK57722.1; -; Genomic_DNA.
DR RefSeq; WP_065746398.1; NZ_MAXC01000023.1.
DR AlphaFoldDB; A0A1B9YSY0; -.
DR STRING; 189873.LMTR3_01055; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000093220; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR CDD; cd05691; S1_RPS1_repeat_ec6; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 5.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000093220};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:OCK57722.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 32..98
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 116..182
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 203..271
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 288..358
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 375..445
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 456..531
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 567 AA; 62873 MW; F5D139B55A965DB6 CRC64;
MASTTAASYN PTRDDFAAML DESFAGGNLQ ESSVIKGKVV AIEKDMAVID VGLKTEGRVA
LREFAGPGRE SDLKVGDEVE VFLDRIENAL GEAVLSRDKA RREESWGKLE KAFNNNEKVH
GVIFNQVKGG FTVDLDGAVA FLPRSQVDIR PIRDVAPLMN NSQPFQILKM DRRRGNIVVS
RRTVLEETRA EQRQELVQNL EEGQVIDGVV KNITDYGAFV DLGGIDGLLH VTDIAWRRVN
HPTEVLTIGQ TVKVKIIKIN HETHRISLGM KQLLDDPWQG IEAKYPLNAR FTGRVTNITD
YGAFVELEPG IEGLIHVSEM SWTKKNMHPG KIVSTSQEVE VQVLEVDSVK RRISLGLKQT
MRNPWEVFVE KFPVGSVVEG EVKNKTEFGL FLGLDGDVDG MVHLSDLDWK LPGEQVIDNF
KKGDMVKAVV LDVDVEKERI SLGVKQLEGD PFAEPGDVKK GAVVTCEVLE VKEAGIEVKI
SGTDFTTFIK RSELARDRND QRAERFAIGE KVDARVIQFD KKARKVQVSI KALEVAEEKE
AIAQYGSSDS GATLGDILGT ALKNREK
//
