ID A0A1C6MJ64_9BURK Unreviewed; 493 AA.
AC A0A1C6MJ64;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN ORFNames=VAR608DRAFT_1362 {ECO:0000313|EMBL:SCK18867.1};
OS Variovorax sp. HW608.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Variovorax.
OX NCBI_TaxID=1034889 {ECO:0000313|EMBL:SCK18867.1, ECO:0000313|Proteomes:UP000198203};
RN [1] {ECO:0000313|Proteomes:UP000198203}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HW608 {ECO:0000313|Proteomes:UP000198203};
RA Varghese N., Submissions Spin;
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
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DR EMBL; LT607803; SCK18867.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1C6MJ64; -.
DR OrthoDB; 1123084at2; -.
DR Proteomes; UP000198203; Chromosome i.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 10..64
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 493 AA; 54933 MW; 09162490FBE01D90 CRC64;
MHKTYMGVRL KTLREQRGIT QAALAQALKL SPSYLNQLEN NQRPLTVPVL LRLQSTMGVD
LQFFSEDEEA RLLSELREVV AEAAGQDLVP NSEVQALVAQ LPAIAQVLTR LHKRCRSAEE
RLALLAGGLD GDRNPSFFAA PLQPFEEVRD YFYERHNHMA VLDERAEELF EKLRRDEARR
RKTNPDDVTA VGGDLVPLLE RHLAAVHGVA TLKTRRFGNN ADVVRGFNPT DRTLSLSADL
EPGQRAFQLA TQIARLDAED LIESFANHAS FGSDEARALA RIGFASYFAG ALLLPYRRFL
AEAEALRYDI ELLSQHFSVS FETVCHRLST MQRPDAKGIP FFFVRVDRAG NISKRQSATD
FHFSRTGGTC PLWNVYEAFA QPGKILTQLA SMPDGRTYLW IARCISRRRG GFGAPARTFA
VALGCDVRHA HRLVYATGID LSNPDAATPI GAGCKICDRE NCAQRAFPAV GRELQVNENL
RQFAPYASAI LPQ
//
