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Database: UniProt
Entry: A0A1C7M2V5_GRIFR
LinkDB: A0A1C7M2V5_GRIFR
Original site: A0A1C7M2V5_GRIFR 
ID   A0A1C7M2V5_GRIFR        Unreviewed;      1258 AA.
AC   A0A1C7M2V5;
DT   30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT   30-NOV-2016, sequence version 1.
DT   24-JAN-2024, entry version 26.
DE   SubName: Full=DNA repair protein rhp42 {ECO:0000313|EMBL:OBZ71283.1};
DE   Flags: Fragment;
GN   Name=rhp42 {ECO:0000313|EMBL:OBZ71283.1};
GN   ORFNames=A0H81_08688 {ECO:0000313|EMBL:OBZ71283.1};
OS   Grifola frondosa (Maitake) (Polyporus frondosus).
OC   Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC   Polyporales; Grifolaceae; Grifola.
OX   NCBI_TaxID=5627 {ECO:0000313|EMBL:OBZ71283.1, ECO:0000313|Proteomes:UP000092993};
RN   [1] {ECO:0000313|EMBL:OBZ71283.1, ECO:0000313|Proteomes:UP000092993}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=9006-11 {ECO:0000313|EMBL:OBZ71283.1,
RC   ECO:0000313|Proteomes:UP000092993};
RA   Min B., Park H., Kim J.-G., Cho H., Oh Y.-L., Kong W.-S., Choi I.-G.;
RT   "Whole genome sequencing of Grifola frondosa 9006-11.";
RL   Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the XPC family. {ECO:0000256|ARBA:ARBA00009525}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:OBZ71283.1}.
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DR   EMBL; LUGG01000011; OBZ71283.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1C7M2V5; -.
DR   STRING; 5627.A0A1C7M2V5; -.
DR   OMA; VENRMVY; -.
DR   OrthoDB; 181129at2759; -.
DR   Proteomes; UP000092993; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR   GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR   Gene3D; 2.20.20.110; Rad4, beta-hairpin domain BHD1; 1.
DR   Gene3D; 3.30.70.2460; Rad4, beta-hairpin domain BHD3; 2.
DR   Gene3D; 3.90.260.10; Transglutaminase-like; 1.
DR   InterPro; IPR018327; BHD_2.
DR   InterPro; IPR004583; DNA_repair_Rad4.
DR   InterPro; IPR038765; Papain-like_cys_pep_sf.
DR   InterPro; IPR018325; Rad4/PNGase_transGLS-fold.
DR   InterPro; IPR018326; Rad4_beta-hairpin_dom1.
DR   InterPro; IPR018328; Rad4_beta-hairpin_dom3.
DR   InterPro; IPR042488; Rad4_BHD3_sf.
DR   InterPro; IPR002931; Transglutaminase-like.
DR   InterPro; IPR036985; Transglutaminase-like_sf.
DR   PANTHER; PTHR12135:SF0; DNA REPAIR PROTEIN COMPLEMENTING XP-C CELLS; 1.
DR   PANTHER; PTHR12135; DNA REPAIR PROTEIN XP-C / RAD4; 1.
DR   Pfam; PF10403; BHD_1; 1.
DR   Pfam; PF10404; BHD_2; 1.
DR   Pfam; PF10405; BHD_3; 2.
DR   Pfam; PF03835; Rad4; 1.
DR   Pfam; PF01841; Transglut_core; 1.
DR   SMART; SM01030; BHD_1; 1.
DR   SMART; SM01031; BHD_2; 1.
DR   SMART; SM01032; BHD_3; 1.
DR   SUPFAM; SSF54001; Cysteine proteinases; 1.
PE   3: Inferred from homology;
KW   DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW   DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000092993}.
FT   DOMAIN          523..573
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01030"
FT   DOMAIN          575..654
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01031"
FT   DOMAIN          661..778
FT                   /note="Rad4 beta-hairpin"
FT                   /evidence="ECO:0000259|SMART:SM01032"
FT   REGION          1..48
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          181..203
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          250..344
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          975..1084
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        8..22
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        184..203
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        978..1003
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1029..1058
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1059..1073
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1258
FT                   /evidence="ECO:0000313|EMBL:OBZ71283.1"
SQ   SEQUENCE   1258 AA;  138717 MW;  D35D846B1D0E669F CRC64;
     MIAENSSVVE DDTDDDFDWE EVEAPPQQVA QPVNDLSAHE DLEEGPSERP NIEITIQVAK
     KKGPAAGKKN AKAVQLHAER LVRVDCHKIH TVGLLANARI RNKWINDPLL HARLMSLTPL
     ELQNAFALIH KSRVPEAPMR GRLFEAAITH LAEWWSNFFQ VEPEGHIRSR TFDEVQRTLV
     PADPKGKGKA RARDVDEDGG EVVRSEKSLM KHALMRRGSR DTSAQLFTAL CRALGIPARL
     VVSLQSVPWQ AGVGKPKPST KKAKKKGDES AGGSASAKGK EKAVEAEGDD GDEDDDMEEV
     VIPSVSSPRV NGKGKEKEVF PGSGQRLDGS STPLNGKDKG KEKAPPVIRL RKSKGQKLGT
     TAPEQPKPSA YIRYFRALCA LINFILNSGE RTPDPTTTAP VFWTEVFSRA DARWIPVDPI
     RCIVNKRKAF DPTPNPNATV KPDRKRPVKV ENRMVYVVAF EEDGYGRDVT PRYAREYGAK
     VAKVQQGGKG RQEWWERILK LVERPYRLQR DDLEDEELQF HQLTEGMPTS VAGFKNHPLY
     VLARHLKRDQ IVEPPVELGK FRGEPVYPRS SVISLKTAEN WMRQGRNVRE GCQPLKWVKQ
     HAVTVNKKRA IEMAMADRKD KGLDNQAVEE GLGNEGGVMQ GLYAEHQTEL YKPDPVIDGR
     VPKNDFGNID LYVPTMLPAG AMHIPCELVE LYLKACTLRI TSSYILDKGT AKIARQLGFD
     FAEAVVRASL PLRSYTMNPH TISSHRQTGF EFKKRRAFPV ISGVVVAAEN EEALLEVGSS
     SQTFVSRIQF AGRFTPAYWE AERDAEAKRR AKRQEQVIKR WTKLVQGLRI RQRLQEQYAD
     RGVRQGDESI AAEGTAEEEQ MPGGFLTGAD DVVQPFTLPR NLHEVPKAST SKLLVVDSSA
     GSSVDVTENE FMETQRSTPQ LGVEDEEEDD MEEIIPVQLN RAPKTMRELA EDAARHQQIE
     DNIEKFDALK TSVALSEAEK VSVKTTRSAT RTPQSNTETP AASSKPRIRL VTRQTRKRSR
     KKSEDSLPDQ QSESVGSSRP SPSKRARSCC INTSASGADS KKREQDSRGE GDGAGIQKGH
     PGLRNVETPV NVIFPIHPKI KLTSFGGVAA ELSGVDCVSS TVTGVPAVRM AGKRHAKVCP
     RTSGNAFDKQ ILGGAVVSAA TPVFCIIGAG VPHADMVGVS SDFIAESSSS FMALAGCALS
     PSSSSSVFGR FPASPSSPLS SALRLPPRDV RDCSIWRSRF SSRRCSAFFS FSLMALTG
//
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