ID A0A1C7M2V5_GRIFR Unreviewed; 1258 AA.
AC A0A1C7M2V5;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 24-JAN-2024, entry version 26.
DE SubName: Full=DNA repair protein rhp42 {ECO:0000313|EMBL:OBZ71283.1};
DE Flags: Fragment;
GN Name=rhp42 {ECO:0000313|EMBL:OBZ71283.1};
GN ORFNames=A0H81_08688 {ECO:0000313|EMBL:OBZ71283.1};
OS Grifola frondosa (Maitake) (Polyporus frondosus).
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes;
OC Polyporales; Grifolaceae; Grifola.
OX NCBI_TaxID=5627 {ECO:0000313|EMBL:OBZ71283.1, ECO:0000313|Proteomes:UP000092993};
RN [1] {ECO:0000313|EMBL:OBZ71283.1, ECO:0000313|Proteomes:UP000092993}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=9006-11 {ECO:0000313|EMBL:OBZ71283.1,
RC ECO:0000313|Proteomes:UP000092993};
RA Min B., Park H., Kim J.-G., Cho H., Oh Y.-L., Kong W.-S., Choi I.-G.;
RT "Whole genome sequencing of Grifola frondosa 9006-11.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the XPC family. {ECO:0000256|ARBA:ARBA00009525}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OBZ71283.1}.
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DR EMBL; LUGG01000011; OBZ71283.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1C7M2V5; -.
DR STRING; 5627.A0A1C7M2V5; -.
DR OMA; VENRMVY; -.
DR OrthoDB; 181129at2759; -.
DR Proteomes; UP000092993; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:InterPro.
DR GO; GO:0003684; F:damaged DNA binding; IEA:InterPro.
DR GO; GO:0006289; P:nucleotide-excision repair; IEA:InterPro.
DR Gene3D; 2.20.20.110; Rad4, beta-hairpin domain BHD1; 1.
DR Gene3D; 3.30.70.2460; Rad4, beta-hairpin domain BHD3; 2.
DR Gene3D; 3.90.260.10; Transglutaminase-like; 1.
DR InterPro; IPR018327; BHD_2.
DR InterPro; IPR004583; DNA_repair_Rad4.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR018325; Rad4/PNGase_transGLS-fold.
DR InterPro; IPR018326; Rad4_beta-hairpin_dom1.
DR InterPro; IPR018328; Rad4_beta-hairpin_dom3.
DR InterPro; IPR042488; Rad4_BHD3_sf.
DR InterPro; IPR002931; Transglutaminase-like.
DR InterPro; IPR036985; Transglutaminase-like_sf.
DR PANTHER; PTHR12135:SF0; DNA REPAIR PROTEIN COMPLEMENTING XP-C CELLS; 1.
DR PANTHER; PTHR12135; DNA REPAIR PROTEIN XP-C / RAD4; 1.
DR Pfam; PF10403; BHD_1; 1.
DR Pfam; PF10404; BHD_2; 1.
DR Pfam; PF10405; BHD_3; 2.
DR Pfam; PF03835; Rad4; 1.
DR Pfam; PF01841; Transglut_core; 1.
DR SMART; SM01030; BHD_1; 1.
DR SMART; SM01031; BHD_2; 1.
DR SMART; SM01032; BHD_3; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
PE 3: Inferred from homology;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000092993}.
FT DOMAIN 523..573
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01030"
FT DOMAIN 575..654
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01031"
FT DOMAIN 661..778
FT /note="Rad4 beta-hairpin"
FT /evidence="ECO:0000259|SMART:SM01032"
FT REGION 1..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 181..203
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 250..344
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 975..1084
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 8..22
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 184..203
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 978..1003
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1029..1058
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1059..1073
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1258
FT /evidence="ECO:0000313|EMBL:OBZ71283.1"
SQ SEQUENCE 1258 AA; 138717 MW; D35D846B1D0E669F CRC64;
MIAENSSVVE DDTDDDFDWE EVEAPPQQVA QPVNDLSAHE DLEEGPSERP NIEITIQVAK
KKGPAAGKKN AKAVQLHAER LVRVDCHKIH TVGLLANARI RNKWINDPLL HARLMSLTPL
ELQNAFALIH KSRVPEAPMR GRLFEAAITH LAEWWSNFFQ VEPEGHIRSR TFDEVQRTLV
PADPKGKGKA RARDVDEDGG EVVRSEKSLM KHALMRRGSR DTSAQLFTAL CRALGIPARL
VVSLQSVPWQ AGVGKPKPST KKAKKKGDES AGGSASAKGK EKAVEAEGDD GDEDDDMEEV
VIPSVSSPRV NGKGKEKEVF PGSGQRLDGS STPLNGKDKG KEKAPPVIRL RKSKGQKLGT
TAPEQPKPSA YIRYFRALCA LINFILNSGE RTPDPTTTAP VFWTEVFSRA DARWIPVDPI
RCIVNKRKAF DPTPNPNATV KPDRKRPVKV ENRMVYVVAF EEDGYGRDVT PRYAREYGAK
VAKVQQGGKG RQEWWERILK LVERPYRLQR DDLEDEELQF HQLTEGMPTS VAGFKNHPLY
VLARHLKRDQ IVEPPVELGK FRGEPVYPRS SVISLKTAEN WMRQGRNVRE GCQPLKWVKQ
HAVTVNKKRA IEMAMADRKD KGLDNQAVEE GLGNEGGVMQ GLYAEHQTEL YKPDPVIDGR
VPKNDFGNID LYVPTMLPAG AMHIPCELVE LYLKACTLRI TSSYILDKGT AKIARQLGFD
FAEAVVRASL PLRSYTMNPH TISSHRQTGF EFKKRRAFPV ISGVVVAAEN EEALLEVGSS
SQTFVSRIQF AGRFTPAYWE AERDAEAKRR AKRQEQVIKR WTKLVQGLRI RQRLQEQYAD
RGVRQGDESI AAEGTAEEEQ MPGGFLTGAD DVVQPFTLPR NLHEVPKAST SKLLVVDSSA
GSSVDVTENE FMETQRSTPQ LGVEDEEEDD MEEIIPVQLN RAPKTMRELA EDAARHQQIE
DNIEKFDALK TSVALSEAEK VSVKTTRSAT RTPQSNTETP AASSKPRIRL VTRQTRKRSR
KKSEDSLPDQ QSESVGSSRP SPSKRARSCC INTSASGADS KKREQDSRGE GDGAGIQKGH
PGLRNVETPV NVIFPIHPKI KLTSFGGVAA ELSGVDCVSS TVTGVPAVRM AGKRHAKVCP
RTSGNAFDKQ ILGGAVVSAA TPVFCIIGAG VPHADMVGVS SDFIAESSSS FMALAGCALS
PSSSSSVFGR FPASPSSPLS SALRLPPRDV RDCSIWRSRF SSRRCSAFFS FSLMALTG
//