ID A0A1D2MA83_ORCCI Unreviewed; 463 AA.
AC A0A1D2MA83;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Chromodomain-helicase-DNA-binding protein 3 {ECO:0000313|EMBL:ODM89839.1};
GN ORFNames=Ocin01_16841 {ECO:0000313|EMBL:ODM89839.1};
OS Orchesella cincta (Springtail) (Podura cincta).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Collembola;
OC Entomobryomorpha; Entomobryoidea; Orchesellidae; Orchesellinae; Orchesella.
OX NCBI_TaxID=48709 {ECO:0000313|EMBL:ODM89839.1, ECO:0000313|Proteomes:UP000094527};
RN [1] {ECO:0000313|EMBL:ODM89839.1, ECO:0000313|Proteomes:UP000094527}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Mixed pool {ECO:0000313|EMBL:ODM89839.1};
RX PubMed=27289101; DOI=10.1093/gbe/evw134;
RA Faddeeva-Vakhrusheva A., Derks M.F., Anvar S.Y., Agamennone V., Suring W.,
RA Smit S., van Straalen N.M., Roelofs D.;
RT "Gene Family Evolution Reflects Adaptation to Soil Environmental Stressors
RT in the Genome of the Collembolan Orchesella cincta.";
RL Genome Biol. Evol. 8:2106-2117(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ODM89839.1}.
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DR EMBL; LJIJ01002332; ODM89839.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1D2MA83; -.
DR STRING; 48709.A0A1D2MA83; -.
DR OrthoDB; 163389at2759; -.
DR Proteomes; UP000094527; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15532; PHD2_CHD_II; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR013087; Znf_C2H2_type.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45915:SF6; FINGER PROTEIN, PUTATIVE-RELATED; 1.
DR PANTHER; PTHR45915; TRANSCRIPTION INTERMEDIARY FACTOR; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000313|EMBL:ODM89839.1};
KW DNA-binding {ECO:0000313|EMBL:ODM89839.1};
KW Helicase {ECO:0000313|EMBL:ODM89839.1};
KW Hydrolase {ECO:0000313|EMBL:ODM89839.1};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleotide-binding {ECO:0000313|EMBL:ODM89839.1};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000094527};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00042}.
FT DOMAIN 186..212
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 273..322
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 48..85
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 142..179
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 373..412
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 48..63
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 142..167
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 375..391
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 394..412
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 463 AA; 50952 MW; 93DEF7815D4DD09A CRC64;
MYKALVDNGF MKESQLNIVQ DVRAANWKLL MRAEETINLR YHERGSSDVL ASPKQKEDVI
ETGGGGRLSD ASTEAMKKRA GPRRPKLTSV NRHMCLTCDE DFSQTELSQH CQTTGHGKYC
ATSKFYTAGS WKRHLSHCTE VHDESTSSGS TKAKVATRST TSLKRKTSHP VQKPKASSKK
KVTSNWNCMQ CDKSYSVEYS LHRHCRKQKP SHGMYCTVAG KWFYTDVSWK KHVSSCVFKH
QQGVDASIRP QPSSSGSALL EKQVQRKSKY SILESCAVCK DGGDLLWCSN VDCPVLYHLS
CLDPPLKEVP EGDWFCTGCE AQRKTRHRGI SLPEQQVELA ESSSLEEQYV VAAAVSSMIN
QQKGGTIAAR KTKIGRGGQM RDPKPKEPVE SAVEQDGVNQ SSSVSQNDDG TGLMGLQLEN
VIGDGNNVGG GAKPDSIPAL KLRVLGKILA ELESMEGSNF NAK
//
