ID A0A1D2MJN9_ORCCI Unreviewed; 1171 AA.
AC A0A1D2MJN9;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=LIM domain and actin-binding protein 1 {ECO:0000313|EMBL:ODM93218.1};
DE Flags: Fragment;
GN ORFNames=Ocin01_13470 {ECO:0000313|EMBL:ODM93218.1};
OS Orchesella cincta (Springtail) (Podura cincta).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Collembola;
OC Entomobryomorpha; Entomobryoidea; Orchesellidae; Orchesellinae; Orchesella.
OX NCBI_TaxID=48709 {ECO:0000313|EMBL:ODM93218.1, ECO:0000313|Proteomes:UP000094527};
RN [1] {ECO:0000313|EMBL:ODM93218.1, ECO:0000313|Proteomes:UP000094527}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Mixed pool {ECO:0000313|EMBL:ODM93218.1};
RX PubMed=27289101; DOI=10.1093/gbe/evw134;
RA Faddeeva-Vakhrusheva A., Derks M.F., Anvar S.Y., Agamennone V., Suring W.,
RA Smit S., van Straalen N.M., Roelofs D.;
RT "Gene Family Evolution Reflects Adaptation to Soil Environmental Stressors
RT in the Genome of the Collembolan Orchesella cincta.";
RL Genome Biol. Evol. 8:2106-2117(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ODM93218.1}.
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DR EMBL; LJIJ01001044; ODM93218.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1D2MJN9; -.
DR STRING; 48709.A0A1D2MJN9; -.
DR OrthoDB; 7294at2759; -.
DR Proteomes; UP000094527; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd09358; LIM_Mical_like; 2.
DR Gene3D; 2.10.110.10; Cysteine Rich Protein; 2.
DR InterPro; IPR001781; Znf_LIM.
DR PANTHER; PTHR24206:SF95; LIM ZINC-BINDING DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR24206; OS06G0237300 PROTEIN; 1.
DR Pfam; PF00412; LIM; 2.
DR SMART; SM00132; LIM; 2.
DR SUPFAM; SSF57716; Glucocorticoid receptor-like (DNA-binding domain); 4.
DR PROSITE; PS00478; LIM_DOMAIN_1; 2.
DR PROSITE; PS50023; LIM_DOMAIN_2; 2.
PE 4: Predicted;
KW LIM domain {ECO:0000256|ARBA:ARBA00023038, ECO:0000256|PROSITE-
KW ProRule:PRU00125}; Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00125};
KW Reference proteome {ECO:0000313|Proteomes:UP000094527};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00125}.
FT DOMAIN 407..467
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT DOMAIN 1084..1144
FT /note="LIM zinc-binding"
FT /evidence="ECO:0000259|PROSITE:PS50023"
FT REGION 1..50
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 88..113
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 167..238
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 303..328
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 580..599
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 627..646
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 701..724
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 817..956
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..32
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 167..215
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 216..238
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 581..595
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 817..857
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 860..885
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 921..950
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ODM93218.1"
SQ SEQUENCE 1171 AA; 132115 MW; 804F3C6C9B835758 CRC64;
LSCKMASQHQ SSMQSSFKSS SVSDTEGFTS MIESEKLTKP GFDACSSSAS PDNLLIENLE
SDDDVECEEI NRITNIEVHH GGDNLNLAKL SDQHGGGGGA VELEPSPEPN SEELGSNIQD
EMGDDEVENG VEVQEDGVEF QEFNIEHVNM VSKTMIKSSS NSIQQQATAT ATVSSTRTSS
IEQQSSTGER HVETATVESH ESASAVNGTI TEGTKKSSTK LERKTSKAGS KKNKSNAEIS
KENISVSAET KPTEEIAKKL GPGESRVFAK VCVANLRRSF GDLTVIDSVI SASPKIELEF
SGKSRSLDIP RPTRHPNPPP GPSSLPNYSL RKTAAATAAA SSTKLQLFQP SYWETLLCSN
VNKSSFSKFD SLAKNNEKNN QVQAIENNQE STEQESSCVS KPESKKMYCT SCEKQVFQME
LIRAEKKDWH KNCFRCVTCR KVLSMDTYQS HEHKLYCKPH FKELFQPKAV VEEPQEERKK
PKLQVIICES QPKELPPDVV RASDTPSTGL EDISIDVRSK FELFENFKES NDKQSAEPLP
VKRSASVLAK LKKYENSLSN GNSELNGVSD EDLHGVEGIE LQSDEEEEEE EEENSVIKSE
INRKLKNPLQ ALNEIAHFKQ MEQVRSKWED GALTQSSASD SRKEELQKFR SRLCQGKSNQ
LKEMYEKALE GDTGNPTASR QEIEDLKSER ARTFREMFEK GEIRKFDDDD EEEEEESDQV
DRRGVDLEVF EAGVAKQSRS LFEKLDKRIN EEQRTVVEPV KKRAGQFNKT MVAQFQNVPT
SPVDVVRCLD KGDEPAKVNT AELSSKFKFF ETYEDELQRK HQENKRDTLK RITSPREGIV
KTEKDYEDDE DGAYRDPNVV RSSESAQDDT LQKSKTASKM LNIFRQMEEN MSKGDAKDPI
IRPMKQFTPP RDTAPRVYSN DSEEEEEEEE EAEEAEEEEE EEEDEENVTE QGSRDEFLKE
VGSLARARSL RAKFERWEQQ ENERNKAIVQ EELAESIESA RNLKAKFEAM RLMEKENPTS
RNSPQPLKVN RFVLNNNLIQ RVSPDSFESY SGYHATSLPV SLNTENSSTN GSLSSSSNIM
SSNEQCAMCE KRVYAMEKIE AGGKLYHKNC FRCSQCKSIL RMDTFTSNKG TLFCTTHFKQ
LFKIKGNYDE GFGHETQYQV WAKKQSATQQ N
//
