ID A0A1D2X236_9EURY Unreviewed; 414 AA.
AC A0A1D2X236;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=Nop domain-containing protein {ECO:0000259|PROSITE:PS51358};
GN ORFNames=NL43_05255 {ECO:0000313|EMBL:OED29960.1};
OS Methanosphaera sp. WGK6.
OC Archaea; Euryarchaeota; Methanomada group; Methanobacteria;
OC Methanobacteriales; Methanobacteriaceae; Methanosphaera.
OX NCBI_TaxID=1561964 {ECO:0000313|EMBL:OED29960.1, ECO:0000313|Proteomes:UP000094737};
RN [1] {ECO:0000313|EMBL:OED29960.1, ECO:0000313|Proteomes:UP000094737}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WGK6 {ECO:0000313|EMBL:OED29960.1,
RC ECO:0000313|Proteomes:UP000094737};
RX PubMed=27022996; DOI=10.1038/ismej.2016.41;
RA Hoedt E.C., Cuiv P.O., Evans P.N., Smith W.J., McSweeney C.S., Denman S.E.,
RA Morrison M.;
RT "Differences down-under: alcohol-fueled methanogenesis by archaea present
RT in Australian macropodids.";
RL ISME J. 10:2376-2388(2016).
CC -!- SIMILARITY: Belongs to the NOP5/NOP56 family.
CC {ECO:0000256|ARBA:ARBA00009211}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OED29960.1}.
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DR EMBL; JRWK01000008; OED29960.1; -; Genomic_DNA.
DR RefSeq; WP_069592993.1; NZ_JRWK01000008.1.
DR AlphaFoldDB; A0A1D2X236; -.
DR STRING; 1561964.NL43_05255; -.
DR PATRIC; fig|1561964.3.peg.1042; -.
DR OrthoDB; 11877at2157; -.
DR Proteomes; UP000094737; Unassembled WGS sequence.
DR GO; GO:0031428; C:box C/D RNP complex; IEA:InterPro.
DR GO; GO:0032040; C:small-subunit processome; IEA:InterPro.
DR GO; GO:0030515; F:snoRNA binding; IEA:InterPro.
DR Gene3D; 1.10.150.460; -; 1.
DR Gene3D; 3.30.420.220; -; 1.
DR Gene3D; 1.10.287.660; Helix hairpin bin; 1.
DR Gene3D; 1.10.246.90; Nop domain; 1.
DR InterPro; IPR029012; Helix_hairpin_bin_sf.
DR InterPro; IPR045056; Nop56/Nop58.
DR InterPro; IPR047099; Nop5_N_sf.
DR InterPro; IPR042239; Nop_C.
DR InterPro; IPR002687; Nop_dom.
DR InterPro; IPR036070; Nop_dom_sf.
DR InterPro; IPR012976; NOSIC.
DR PANTHER; PTHR10894; NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58; 1.
DR PANTHER; PTHR10894:SF0; NUCLEOLAR PROTEIN 56; 1.
DR Pfam; PF01798; Nop; 1.
DR SMART; SM00931; NOSIC; 1.
DR SUPFAM; SSF89124; Nop domain; 1.
DR PROSITE; PS51358; NOP; 1.
PE 3: Inferred from homology;
FT DOMAIN 250..364
FT /note="Nop"
FT /evidence="ECO:0000259|PROSITE:PS51358"
FT REGION 361..414
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 361..383
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 384..408
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 414 AA; 48327 MW; 801E451C8C520FF8 CRC64;
MKCYITTTSF GFIATSQDNT IIEYQLFGKK QVEKLREIQK KQLLPEEKEL IKIVAKNYNE
IIIETSNSKQ LYSDLKDYDK LIFEKTTTNG KYIRANLDQI IHDISELKNI DIRRNLNETY
NEITKEKIRE SIKTNDVMIV ETINSLEEIE ETTGKLIERL REWCTPYVPE LEKLHNHELY
TKLIATETSR ENIRNSSLLE NTHIQLLDVY DVDMIQEDLE IIKEFATSLS RLYETKNNLE
NYIQEKIKEI APNLNDVAGS NLSAKLIAHM NGLENLAKLP SSTIQIIGAE KATFRHLKTG
ENPPKHGLIF QHPSIRGSNW WIRGKLARAV ASKITIAARK DAFSNEYDPN IKIQLDEKIE
KIKKDNPFPS RKTKSNDKQD KKDKKNKKSK KNRKERGKKN KRNKRKLRKG EYTY
//
