ID A0A1D3JK20_PLAMA Unreviewed; 1135 AA.
AC A0A1D3JK20;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=tRNA m5C-methyltransferase, putative {ECO:0000313|EMBL:SBT86868.1};
DE EC=2.1.1.- {ECO:0000313|EMBL:SBT86868.1};
GN Name=PmUG01_01015700 {ECO:0000313|EMBL:SBT86868.1};
GN ORFNames=PMUG01_01015700 {ECO:0000313|EMBL:SBT86868.1};
OS Plasmodium malariae.
OC Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida;
OC Plasmodiidae; Plasmodium; Plasmodium (Plasmodium).
OX NCBI_TaxID=5858 {ECO:0000313|EMBL:SBT86868.1, ECO:0000313|Proteomes:UP000219813};
RN [1] {ECO:0000313|EMBL:SBT86868.1, ECO:0000313|Proteomes:UP000219813}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG Pathogen Informatics;
RL Submitted (JUN-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the class I-like SAM-binding methyltransferase
CC superfamily. RsmB/NOP family. {ECO:0000256|PROSITE-ProRule:PRU01023}.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU01023}.
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DR EMBL; LT594622; SBT86868.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1D3JK20; -.
DR VEuPathDB; PlasmoDB:PmUG01_01015700; -.
DR OrthoDB; 197651at2759; -.
DR Proteomes; UP000219813; Chromosome 1.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0008173; F:RNA methyltransferase activity; IEA:InterPro.
DR GO; GO:0001510; P:RNA methylation; IEA:InterPro.
DR Gene3D; 3.40.50.150; Vaccinia Virus protein VP39; 2.
DR InterPro; IPR049560; MeTrfase_RsmB-F_NOP2_cat.
DR InterPro; IPR001678; MeTrfase_RsmB-F_NOP2_dom.
DR InterPro; IPR023267; RCMT.
DR InterPro; IPR029063; SAM-dependent_MTases_sf.
DR PANTHER; PTHR22808; NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING; 1.
DR PANTHER; PTHR22808:SF1; RNA CYTOSINE C(5)-METHYLTRANSFERASE NSUN2; 1.
DR Pfam; PF01189; Methyltr_RsmB-F; 1.
DR PRINTS; PR02008; RCMTFAMILY.
DR SUPFAM; SSF53335; S-adenosyl-L-methionine-dependent methyltransferases; 2.
DR PROSITE; PS51686; SAM_MT_RSMB_NOP; 1.
PE 3: Inferred from homology;
KW Methyltransferase {ECO:0000256|ARBA:ARBA00022603, ECO:0000256|PROSITE-
KW ProRule:PRU01023}; Phosphoprotein {ECO:0000256|ARBA:ARBA00022553};
KW Reference proteome {ECO:0000313|Proteomes:UP000219813};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU01023};
KW S-adenosyl-L-methionine {ECO:0000256|ARBA:ARBA00022691,
KW ECO:0000256|PROSITE-ProRule:PRU01023};
KW Transferase {ECO:0000256|ARBA:ARBA00022679, ECO:0000256|PROSITE-
KW ProRule:PRU01023}.
FT DOMAIN 291..550
FT /note="SAM-dependent MTase RsmB/NOP-type"
FT /evidence="ECO:0000259|PROSITE:PS51686"
FT REGION 241..266
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 247..266
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT ACT_SITE 429
FT /note="Nucleophile"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT BINDING 321
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
FT BINDING 376
FT /ligand="S-adenosyl-L-methionine"
FT /ligand_id="ChEBI:CHEBI:59789"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01023"
SQ SEQUENCE 1135 AA; 132961 MW; F32CFA76B0821A98 CRC64;
MKGSTKEIPY YDNSVVLEKN EGFFNYYVNQ NIIKKEEIDN FMEIINKELP ITFRVLKNNK
YSDYIHENIK KKLECICKDN YSIIKLNEED HMYEIYITRS QIKKNENYKN LCSYLINLNE
SGYIFRQELV SMLPILFLKL KENFFVLDIC AAPGSKTAQI VDYMHLINKK NVKNYLIKKF
IQKNCSSINN LRENAGNQDS DSCCSDIRDS EGINSIEGSN GYNDDEYAYM CGNRSTKFSG
RTPVEGNVKT NEHKNVKEND EGERNKTDTE NIYKSYYTIL DNNLYDEKLF EYILNVDNNL
YNDYKKLISN NNPTGVVVAN DANFKRCCML FHRLKNIHSN CLVVTNNNAI NFPYIYIKNG
KENKVEKKFF DSVLCDVPCS GDGTLRKDRN IWLNWNPLNA YNLFQVQVNI LKRSIELTKE
NGVIVYSTCS LNPIENEAVI CEIFNSVENF NCLKLINFEN ELITKLNFKE GITQWRVLID
DIWFDTYQQF CDYLKNKESS KYKKIYDKIQ NGMFTPPKEF IELINLKYVK RFFPHHYNAG
GFFIAVIKKC GKLKWKEKAK RENMNKCIVN KNVISNRNKL EKGELRKKYK NRKYKKSNKK
KKNKNGDLSF NGYNIKQNFS REIENEQRKI LEIKNNSPEQ VIQNGLRKSC SPVNSDGSVM
DDEHIEKNYN VVNHDLIMKN YKVIDNINDT RNYQVIGDGD ITKNYNNEEN GNVTKNDNLE
ENDNFEKNYN VIDSDFIISS CPIRRPHETS KGDVIINLIN RKSEEKLNNY SKNEMDSSVE
YTEQYDILKE NNKTANGYVK PKGSVQTKCK VEDQIYMGNE KLTKQQEYVS LDYYEKLFCI
NDTLERIKNY FNLNEEFLSI KSNLYIHLKD DSNFCKLSIN ERINSNIKKI NFVSNYTKDI
LECYTKIKLK IISAGITVIQ IDKNKKNKVE NYYRINYSGC LNFVPFFKDV DAFLLNKIYR
KEIIKNYFSP IYENKNRVFH FESYMNQLIG ERKSTLSKGT TNNTKVVKNV GENTHPASYV
NNEKITNSLG GEENLSEEKN KHNKYSDETE KKNMNTIWVK SDVILDLIKV DKSKINNITN
ETIKQTEKLT KYSPNILLTL NKNKQILAIP SNKGNLYVDI SIDKNSIIML PYILN
//