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Database: UniProt
Entry: A0A1D5PBF9_CHICK
LinkDB: A0A1D5PBF9_CHICK
Original site: A0A1D5PBF9_CHICK 
ID   A0A1D5PBF9_CHICK        Unreviewed;       373 AA.
AC   A0A1D5PBF9;
DT   30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT   10-APR-2019, sequence version 2.
DT   24-JAN-2024, entry version 35.
DE   SubName: Full=SRY-box 1 {ECO:0000313|Ensembl:ENSGALP00010022299.1};
GN   Name=SOX1 {ECO:0000313|Ensembl:ENSGALP00010022299.1};
OS   Gallus gallus (Chicken).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC   Phasianinae; Gallus.
OX   NCBI_TaxID=9031 {ECO:0000313|Ensembl:ENSGALP00010022299.1, ECO:0000313|Proteomes:UP000000539};
RN   [1] {ECO:0000313|Ensembl:ENSGALP00010022299.1}
RP   IDENTIFICATION.
RC   STRAIN=broiler {ECO:0000313|Ensembl:ENSGALP00010022299.1};
RG   Ensembl;
RL   Submitted (JUL-2023) to UniProtKB.
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DR   AlphaFoldDB; A0A1D5PBF9; -.
DR   SMR; A0A1D5PBF9; -.
DR   Ensembl; ENSGALT00010038537.1; ENSGALP00010022299.1; ENSGALG00010015997.1.
DR   VEuPathDB; HostDB:geneid_374240; -.
DR   GeneTree; ENSGT00940000162479; -.
DR   InParanoid; A0A1D5PBF9; -.
DR   OMA; GPKANQD; -.
DR   Proteomes; UP000000539; Chromosome 1.
DR   Bgee; ENSGALG00000030353; Expressed in brain and 3 other cell types or tissues.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0001228; F:DNA-binding transcription activator activity, RNA polymerase II-specific; IEA:Ensembl.
DR   GO; GO:0000981; F:DNA-binding transcription factor activity, RNA polymerase II-specific; IBA:GO_Central.
DR   GO; GO:0000978; F:RNA polymerase II cis-regulatory region sequence-specific DNA binding; IBA:GO_Central.
DR   GO; GO:0009653; P:anatomical structure morphogenesis; IBA:GO_Central.
DR   GO; GO:0030154; P:cell differentiation; IBA:GO_Central.
DR   GO; GO:1990830; P:cellular response to leukemia inhibitory factor; IEA:Ensembl.
DR   GO; GO:0021884; P:forebrain neuron development; IEA:Ensembl.
DR   GO; GO:1904936; P:interneuron migration; IEA:Ensembl.
DR   GO; GO:0002089; P:lens morphogenesis in camera-type eye; IEA:Ensembl.
DR   GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IEA:Ensembl.
DR   GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR   GO; GO:0048713; P:regulation of oligodendrocyte differentiation; IEA:Ensembl.
DR   GO; GO:0021521; P:ventral spinal cord interneuron specification; IEA:Ensembl.
DR   CDD; cd01388; HMG-box_SoxB; 1.
DR   Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR   InterPro; IPR009071; HMG_box_dom.
DR   InterPro; IPR036910; HMG_box_dom_sf.
DR   InterPro; IPR022097; SOX_fam.
DR   PANTHER; PTHR10270; SOX TRANSCRIPTION FACTOR; 1.
DR   PANTHER; PTHR10270:SF40; TRANSCRIPTION FACTOR SOX-1; 1.
DR   Pfam; PF00505; HMG_box; 1.
DR   Pfam; PF12336; SOXp; 1.
DR   SMART; SM00398; HMG; 1.
DR   SUPFAM; SSF47095; HMG-box; 1.
DR   PROSITE; PS50118; HMG_BOX_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000539}.
SQ   SEQUENCE   373 AA;  37909 MW;  9BC0137BAC8BCCA8 CRC64;
     MYSMMMETDL HSPGGAPAPG GGLSGQSGAG GGGGGGGGGG GKAGQDRVKR PMNAFMVWSR
     GQRRKMAQEN PKMHNSEISK RLGAEWKVMS EAEKRPFIDE AKRLRALHMK EHPDYKYRPR
     RKTKTLLKKD KYSLAGGLLG AGPAAGGPPA VGVGMGVGVS PGGVGQRLES PGGAAGGGYA
     HMNGWANGAY PGSVAAAAAA AAMMQEAQLA YGQHPGGGGH PHHPHPHHPH HPHNPQPMHR
     YDMGALQYSP ISNSQGYVSA SPSGYGALPY GSQPHQNSAA AAAAAAAAAA ASSGALGALG
     SLVKSEPSVS PPVTSHSRAP CPGDLREMIS MYLPGGEGGD PAAAAAQSRL HSLPQHYQSA
     STGVNGTVPL THI
//
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