ID A0A1D5YKH2_WHEAT Unreviewed; 137 AA.
AC A0A1D5YKH2;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=Histone H2A {ECO:0000256|RuleBase:RU003767};
GN ORFNames=CFC21_067614 {ECO:0000313|EMBL:KAF7060868.1}, CFC21_073482
GN {ECO:0000313|EMBL:KAF7067615.1}, CFC21_079447
GN {ECO:0000313|EMBL:KAF7074605.1};
OS Triticum aestivum (Wheat).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Pooideae; Triticodae; Triticeae; Triticinae; Triticum.
OX NCBI_TaxID=4565 {ECO:0000313|EnsemblPlants:TraesCS5A02G382700.1};
RN [1] {ECO:0000313|EMBL:KAF7060868.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7060868.1};
RX PubMed=29069494;
RA Zimin A.V., Puiu D., Hall R., Kingan S., Clavijo B.J., Salzberg S.L.;
RT "The first near-complete assembly of the hexaploid bread wheat genome,
RT Triticum aestivum.";
RL Gigascience 6:1-7(2017).
RN [2] {ECO:0000313|EnsemblPlants:TraesCS5A02G382700.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Chinese Spring
RC {ECO:0000313|EnsemblPlants:TraesCS5A02G382700.1};
RX PubMed=30115783; DOI=10.1126/science.aar7191;
RG International wheat genome sequencing consortium (IWGSC);
RT "Shifting the limits in wheat research and breeding using a fully annotated
RT reference genome.";
RL Science 361:EAAR7191-EAAR7191(2018).
RN [3] {ECO:0000313|EnsemblPlants:TraesCS5A02G382700.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (OCT-2018) to UniProtKB.
RN [4] {ECO:0000313|EMBL:KAF7060868.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Leaf {ECO:0000313|EMBL:KAF7060868.1};
RA Zimin A.V., Puiu D., Shumante A., Alonge M., Salzberg S.L.;
RT "The second near-complete assembly of the hexaploid bread wheat (Triticum
RT aestivum) genome.";
RL Submitted (MAR-2020) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBUNIT: The nucleosome is a histone octamer containing two molecules
CC each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and
CC two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of
CC DNA. {ECO:0000256|RuleBase:RU003767}.
CC -!- SUBCELLULAR LOCATION: Chromosome {ECO:0000256|ARBA:ARBA00004286}.
CC Nucleus {ECO:0000256|ARBA:ARBA00004123, ECO:0000256|RuleBase:RU003767}.
CC -!- SIMILARITY: Belongs to the histone H2A family.
CC {ECO:0000256|ARBA:ARBA00010691, ECO:0000256|RuleBase:RU003767}.
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DR EMBL; CM022223; KAF7060868.1; -; Genomic_DNA.
DR EMBL; CM022224; KAF7067615.1; -; Genomic_DNA.
DR EMBL; CM022225; KAF7074605.1; -; Genomic_DNA.
DR SMR; A0A1D5YKH2; -.
DR STRING; 4565.A0A1D5YKH2; -.
DR EnsemblPlants; TraesCS5A02G382700.1; TraesCS5A02G382700.1; TraesCS5A02G382700.
DR EnsemblPlants; TraesCS5B02G387100.1; TraesCS5B02G387100.1; TraesCS5B02G387100.
DR EnsemblPlants; TraesCS5D02G392100.1; TraesCS5D02G392100.1; TraesCS5D02G392100.
DR Gramene; TraesCAD_scaffold_010553_01G000300.1; TraesCAD_scaffold_010553_01G000300.1; TraesCAD_scaffold_010553_01G000300.
DR Gramene; TraesCAD_scaffold_073941_01G000300.1; TraesCAD_scaffold_073941_01G000300.1; TraesCAD_scaffold_073941_01G000300.
DR Gramene; TraesCAD_scaffold_075607_01G000100.1; TraesCAD_scaffold_075607_01G000100.1; TraesCAD_scaffold_075607_01G000100.
DR Gramene; TraesCLE_scaffold_008547_01G000100.1; TraesCLE_scaffold_008547_01G000100.1; TraesCLE_scaffold_008547_01G000100.
DR Gramene; TraesCLE_scaffold_019412_01G000100.1; TraesCLE_scaffold_019412_01G000100.1; TraesCLE_scaffold_019412_01G000100.
DR Gramene; TraesCLE_scaffold_108964_01G000300.1; TraesCLE_scaffold_108964_01G000300.1; TraesCLE_scaffold_108964_01G000300.
DR Gramene; TraesCS5A02G382700.1; TraesCS5A02G382700.1; TraesCS5A02G382700.
DR Gramene; TraesCS5A03G0917900.1; TraesCS5A03G0917900.1.CDS; TraesCS5A03G0917900.
DR Gramene; TraesCS5B02G387100.1; TraesCS5B02G387100.1; TraesCS5B02G387100.
DR Gramene; TraesCS5B03G0967400.1; TraesCS5B03G0967400.1.CDS; TraesCS5B03G0967400.
DR Gramene; TraesCS5D02G392100.1; TraesCS5D02G392100.1; TraesCS5D02G392100.
DR Gramene; TraesCS5D03G0877300.1; TraesCS5D03G0877300.1.CDS; TraesCS5D03G0877300.
DR Gramene; TraesKAR5A01G0353290.1; cds.TraesKAR5A01G0353290.1; TraesKAR5A01G0353290.
DR Gramene; TraesKAR5B01G0374670.1; cds.TraesKAR5B01G0374670.1; TraesKAR5B01G0374670.
DR Gramene; TraesKAR5B01G0374670.2; cds.TraesKAR5B01G0374670.2; TraesKAR5B01G0374670.
DR Gramene; TraesKAR5D01G0335100.1; cds.TraesKAR5D01G0335100.1; TraesKAR5D01G0335100.
DR Gramene; TraesKAR5D01G0335100.2; cds.TraesKAR5D01G0335100.2; TraesKAR5D01G0335100.
DR Gramene; TraesPAR_scaffold_008602_01G000100.1; TraesPAR_scaffold_008602_01G000100.1; TraesPAR_scaffold_008602_01G000100.
DR Gramene; TraesPAR_scaffold_107702_01G000100.1; TraesPAR_scaffold_107702_01G000100.1; TraesPAR_scaffold_107702_01G000100.
DR Gramene; TraesPAR_scaffold_117979_01G000100.1; TraesPAR_scaffold_117979_01G000100.1; TraesPAR_scaffold_117979_01G000100.
DR Gramene; TraesRN5A0100931200.1; TraesRN5A0100931200.1; TraesRN5A0100931200.
DR Gramene; TraesRN5D0100921800.1; TraesRN5D0100921800.1; TraesRN5D0100921800.
DR Gramene; TraesROB_scaffold_010388_01G000300.1; TraesROB_scaffold_010388_01G000300.1; TraesROB_scaffold_010388_01G000300.
DR Gramene; TraesROB_scaffold_057340_01G000100.1; TraesROB_scaffold_057340_01G000100.1; TraesROB_scaffold_057340_01G000100.
DR Gramene; TraesROB_scaffold_114935_01G000300.1; TraesROB_scaffold_114935_01G000300.1; TraesROB_scaffold_114935_01G000300.
DR Gramene; TraesWEE_scaffold_009747_01G000100.1; TraesWEE_scaffold_009747_01G000100.1; TraesWEE_scaffold_009747_01G000100.
DR Gramene; TraesWEE_scaffold_056316_01G000300.1; TraesWEE_scaffold_056316_01G000300.1; TraesWEE_scaffold_056316_01G000300.
DR Gramene; TraesWEE_scaffold_096774_01G000300.1; TraesWEE_scaffold_096774_01G000300.1; TraesWEE_scaffold_096774_01G000300.
DR eggNOG; KOG1757; Eukaryota.
DR OMA; PVGRIHT; -.
DR OrthoDB; 235643at2759; -.
DR Proteomes; UP000019116; Chromosome 5A.
DR Proteomes; UP000019116; Chromosome 5B.
DR Proteomes; UP000019116; Chromosome 5D.
DR Proteomes; UP000815260; Chromosome 5A.
DR Proteomes; UP000815260; Chromosome 5B.
DR Proteomes; UP000815260; Chromosome 5D.
DR ExpressionAtlas; A0A1D5YKH2; baseline and differential.
DR GO; GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IBA:GO_Central.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0030527; F:structural constituent of chromatin; IEA:InterPro.
DR CDD; cd00074; H2A; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR002119; Histone_H2A.
DR InterPro; IPR007125; Histone_H2A/H2B/H3.
DR InterPro; IPR032454; Histone_H2A_C.
DR InterPro; IPR032458; Histone_H2A_CS.
DR PANTHER; PTHR23430; HISTONE H2A; 1.
DR PANTHER; PTHR23430:SF351; HISTONE H2A.8; 1.
DR Pfam; PF00125; Histone; 1.
DR Pfam; PF16211; Histone_H2A_C; 1.
DR PRINTS; PR00620; HISTONEH2A.
DR SMART; SM00414; H2A; 1.
DR SUPFAM; SSF47113; Histone-fold; 1.
DR PROSITE; PS00046; HISTONE_H2A; 1.
PE 3: Inferred from homology;
KW Chromosome {ECO:0000256|ARBA:ARBA00022454, ECO:0000256|RuleBase:RU003767};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|RuleBase:RU003767};
KW Nucleosome core {ECO:0000256|ARBA:ARBA00023269,
KW ECO:0000256|RuleBase:RU003767};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU003767};
KW Reference proteome {ECO:0000313|Proteomes:UP000019116}.
FT DOMAIN 13..105
FT /note="Histone H2A/H2B/H3"
FT /evidence="ECO:0000259|Pfam:PF00125"
FT DOMAIN 107..136
FT /note="Histone H2A C-terminal"
FT /evidence="ECO:0000259|Pfam:PF16211"
FT REGION 1..44
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 137 AA; 14487 MW; 17F8D452077BF9BE CRC64;
MAGKGGKGLL AAKTTAAKTA EKDKGKKAPI SRSSRAGLQF PVGRIHRQLK QRTQANGRVG
ATAAVYSAAI LEYLTAEVLE LAGNASKDLK VKRITPRHLQ LAIRGDEELD TLIKGTIAGG
GVIPHIHKSL INKSSKE
//