GenomeNet

Database: UniProt
Entry: A0A1D6FFF1_MAIZE
LinkDB: A0A1D6FFF1_MAIZE
Original site: A0A1D6FFF1_MAIZE 
ID   A0A1D6FFF1_MAIZE        Unreviewed;      1006 AA.
AC   A0A1D6FFF1;
DT   30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT   30-NOV-2016, sequence version 1.
DT   27-MAR-2024, entry version 41.
DE   SubName: Full=DExH-box ATP-dependent RNA helicase DExH10 {ECO:0000313|EMBL:AQK90664.1};
GN   ORFNames=ZEAMMB73_Zm00001d008777 {ECO:0000313|EMBL:AQK90664.1};
OS   Zea mays (Maize).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX   NCBI_TaxID=4577 {ECO:0000313|EMBL:AQK90664.1};
RN   [1] {ECO:0000313|EMBL:AQK90664.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Seedling {ECO:0000313|EMBL:AQK90664.1};
RG   Maize Genome Sequencing Project;
RA   Ware D.;
RT   "Update maize B73 reference genome by single molecule sequencing
RT   technologies.";
RL   Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CM000784; AQK90664.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1D6FFF1; -.
DR   SMR; A0A1D6FFF1; -.
DR   IntAct; A0A1D6FFF1; 5.
DR   STRING; 4577.A0A1D6FFF1; -.
DR   InParanoid; A0A1D6FFF1; -.
DR   OMA; MTCHLGD; -.
DR   ExpressionAtlas; A0A1D6FFF1; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR   GO; GO:0003724; F:RNA helicase activity; IBA:GO_Central.
DR   GO; GO:0000460; P:maturation of 5.8S rRNA; IBA:GO_Central.
DR   GO; GO:0006401; P:RNA catabolic process; IBA:GO_Central.
DR   CDD; cd18024; DEXHc_Mtr4-like; 1.
DR   CDD; cd18795; SF2_C_Ski2; 1.
DR   Gene3D; 1.10.3380.30; -; 1.
DR   Gene3D; 2.40.30.300; -; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR018247; EF_Hand_1_Ca_BS.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR048392; MTR4-like_stalk.
DR   InterPro; IPR025696; MTR4_beta-barrel.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR016438; SKI2-like.
DR   InterPro; IPR012961; Ski2/MTR4_C.
DR   PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR   PANTHER; PTHR12131:SF32; DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH10; 1.
DR   Pfam; PF00270; DEAD; 1.
DR   Pfam; PF08148; DSHCT; 1.
DR   Pfam; PF00271; Helicase_C; 1.
DR   Pfam; PF21408; MTR4-like_stalk; 1.
DR   Pfam; PF13234; MTR4_beta-barrel; 1.
DR   PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR   SMART; SM00487; DEXDc; 1.
DR   SMART; SM01142; DSHCT; 1.
DR   SMART; SM00490; HELICc; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR   PROSITE; PS00018; EF_HAND_1; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR   PROSITE; PS51194; HELICASE_CTER; 1.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:AQK90664.1};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REGION          1..39
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          297..321
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          665..688
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..17
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1006 AA;  112973 MW;  DACDDCF7747B9B73 CRC64;
     MGEEAESNCK RKAPDSSVEE QPSLAPAPAQ SQADPAAKRP NISRSCVHEV AVPNGYESVK
     DEAVHGTLAS PAFNGEMAKQ YPFKLDPFQS VSIACLERNE SVLVSAHTSA GKTVVAEYAI
     AMAFRDKQRV IYTSPLKALS NQKYRELSQE FTDVGLMTGD VTLHPNATCL VMTTEILRAM
     LYRGSEVIKE VAWVIFDEIH YMKDRERGVV WEESIIFLPP AIKMVFLSAT MSNATEFAEW
     ICSLHKQPCH VVYTDFRPTP LQHYMFPIGG SGLYLVVDEN GQFREDNFAK LQDSFAKPNN
     QLDGRKGGGP KASGRIAKGG SASGNSDIYR IVKMIMERKF QPVIIFSFSR RECEHHAMSM
     SKLDFSTEEE KECIEQVFCN AIGCLVEEDR SLPAIELMLP LLKRGIAVHH SGLLPIIKEL
     VELLFQEGLV KALFATETFA MGLNMPAKTV VFTSVKKWDG DSNRYIGSGE YIQMSGRAGR
     RGKDERGICV IMIDEKVKME MSVIKDMVLG KPAPLVSTFR LSYYTILNLM SRVEGQFTAE
     HVIRHSFHEF QYEKALPEIA QKITRLENEA TLLDSSGETD LAEYHKLGLD ISELEKKIMS
     EMIRPERALL YLVPGRLVRV RDGSTDWGWG VVVNVVKKPP ASGTLPPALS ASRSNNYTVD
     TLLHCSSNSS ENGSRSKPCP PRPGEKGEMH VVPVPLPLVS GLSSVRINIP PDLRPPEARQ
     NILSAVQELG KRYPQGLPKL HPINDMGIQE PELVDLVHKL EDLEQKQCSH RLHKSGQSEQ
     ELSWYQKKAD LNTEIQQLKS KMRDSQLQKF RDELRNRSRV LKMLGHIDAD GVLQLKGRAA
     CLIDTGDELL ITELMFNGTF NDLDHHQVAS LASCFVPCDK SSEQIRLRNE LSRPMMQLQE
     AARKIAEVQR ECKLEVNVEE YVESTCRPYL MDVIYCWSRG ATFAEVMEMT DIFEGSVIRL
     ARRLDEFLNQ LRAAAEAVGE VNLEKKFKNA SESLRRGIMF SNSLYL
//
DBGET integrated database retrieval system