ID A0A1D6FFF1_MAIZE Unreviewed; 1006 AA.
AC A0A1D6FFF1;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE SubName: Full=DExH-box ATP-dependent RNA helicase DExH10 {ECO:0000313|EMBL:AQK90664.1};
GN ORFNames=ZEAMMB73_Zm00001d008777 {ECO:0000313|EMBL:AQK90664.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:AQK90664.1};
RN [1] {ECO:0000313|EMBL:AQK90664.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK90664.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000784; AQK90664.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1D6FFF1; -.
DR SMR; A0A1D6FFF1; -.
DR IntAct; A0A1D6FFF1; 5.
DR STRING; 4577.A0A1D6FFF1; -.
DR InParanoid; A0A1D6FFF1; -.
DR OMA; MTCHLGD; -.
DR ExpressionAtlas; A0A1D6FFF1; baseline and differential.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IBA:GO_Central.
DR GO; GO:0000460; P:maturation of 5.8S rRNA; IBA:GO_Central.
DR GO; GO:0006401; P:RNA catabolic process; IBA:GO_Central.
DR CDD; cd18024; DEXHc_Mtr4-like; 1.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 1.
DR Gene3D; 2.40.30.300; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR018247; EF_Hand_1_Ca_BS.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR025696; MTR4_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF32; DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH10; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00018; EF_HAND_1; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:AQK90664.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REGION 1..39
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 297..321
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 665..688
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..17
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1006 AA; 112973 MW; DACDDCF7747B9B73 CRC64;
MGEEAESNCK RKAPDSSVEE QPSLAPAPAQ SQADPAAKRP NISRSCVHEV AVPNGYESVK
DEAVHGTLAS PAFNGEMAKQ YPFKLDPFQS VSIACLERNE SVLVSAHTSA GKTVVAEYAI
AMAFRDKQRV IYTSPLKALS NQKYRELSQE FTDVGLMTGD VTLHPNATCL VMTTEILRAM
LYRGSEVIKE VAWVIFDEIH YMKDRERGVV WEESIIFLPP AIKMVFLSAT MSNATEFAEW
ICSLHKQPCH VVYTDFRPTP LQHYMFPIGG SGLYLVVDEN GQFREDNFAK LQDSFAKPNN
QLDGRKGGGP KASGRIAKGG SASGNSDIYR IVKMIMERKF QPVIIFSFSR RECEHHAMSM
SKLDFSTEEE KECIEQVFCN AIGCLVEEDR SLPAIELMLP LLKRGIAVHH SGLLPIIKEL
VELLFQEGLV KALFATETFA MGLNMPAKTV VFTSVKKWDG DSNRYIGSGE YIQMSGRAGR
RGKDERGICV IMIDEKVKME MSVIKDMVLG KPAPLVSTFR LSYYTILNLM SRVEGQFTAE
HVIRHSFHEF QYEKALPEIA QKITRLENEA TLLDSSGETD LAEYHKLGLD ISELEKKIMS
EMIRPERALL YLVPGRLVRV RDGSTDWGWG VVVNVVKKPP ASGTLPPALS ASRSNNYTVD
TLLHCSSNSS ENGSRSKPCP PRPGEKGEMH VVPVPLPLVS GLSSVRINIP PDLRPPEARQ
NILSAVQELG KRYPQGLPKL HPINDMGIQE PELVDLVHKL EDLEQKQCSH RLHKSGQSEQ
ELSWYQKKAD LNTEIQQLKS KMRDSQLQKF RDELRNRSRV LKMLGHIDAD GVLQLKGRAA
CLIDTGDELL ITELMFNGTF NDLDHHQVAS LASCFVPCDK SSEQIRLRNE LSRPMMQLQE
AARKIAEVQR ECKLEVNVEE YVESTCRPYL MDVIYCWSRG ATFAEVMEMT DIFEGSVIRL
ARRLDEFLNQ LRAAAEAVGE VNLEKKFKNA SESLRRGIMF SNSLYL
//