ID   A0A1D6G173_MAIZE        Unreviewed;      1792 AA.
AC   A0A1D6G173;
DT   30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT   30-NOV-2016, sequence version 1.
DT   27-MAR-2024, entry version 35.
DE   SubName: Full=Homeobox-DDT domain protein RLT1 {ECO:0000313|EMBL:AQK97188.1};
GN   ORFNames=ZEAMMB73_Zm00001d011560 {ECO:0000313|EMBL:AQK97188.1};
OS   Zea mays (Maize).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX   NCBI_TaxID=4577 {ECO:0000313|EMBL:AQK97188.1};
RN   [1] {ECO:0000313|EMBL:AQK97188.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Seedling {ECO:0000313|EMBL:AQK97188.1};
RG   Maize Genome Sequencing Project;
RA   Ware D.;
RT   "Update maize B73 reference genome by single molecule sequencing
RT   technologies.";
RL   Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|PROSITE-ProRule:PRU00108, ECO:0000256|RuleBase:RU000682}.
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DR   EMBL; CM000784; AQK97188.1; -; Genomic_DNA.
DR   ExpressionAtlas; A0A1D6G173; baseline and differential.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   CDD; cd00086; homeodomain; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   InterPro; IPR007759; Asxl_HARE-HTH.
DR   InterPro; IPR018501; DDT_dom.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001356; Homeobox_dom.
DR   InterPro; IPR044977; RLT1-3.
DR   InterPro; IPR028942; WHIM1_dom.
DR   InterPro; IPR028941; WHIM2_dom.
DR   PANTHER; PTHR36968; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR   PANTHER; PTHR36968:SF5; HOMEOBOX-DDT DOMAIN PROTEIN RLT2; 1.
DR   Pfam; PF02791; DDT; 1.
DR   Pfam; PF05066; HARE-HTH; 1.
DR   Pfam; PF00046; Homeodomain; 1.
DR   Pfam; PF15612; WHIM1; 1.
DR   Pfam; PF15613; WSD; 1.
DR   SMART; SM00571; DDT; 1.
DR   SMART; SM00389; HOX; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   PROSITE; PS50827; DDT; 1.
DR   PROSITE; PS50071; HOMEOBOX_2; 1.
DR   PROSITE; PS51913; HTH_HARE; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Homeobox {ECO:0000256|PROSITE-ProRule:PRU00108,
KW   ECO:0000256|RuleBase:RU000682};
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW   ProRule:PRU00108}; Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT   DOMAIN          44..104
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000259|PROSITE:PS50071"
FT   DOMAIN          618..677
FT                   /note="DDT"
FT                   /evidence="ECO:0000259|PROSITE:PS50827"
FT   DOMAIN          794..863
FT                   /note="HTH HARE-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51913"
FT   DNA_BIND        46..105
FT                   /note="Homeobox"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
SQ   SEQUENCE   1792 AA;  201083 MW;  6A5EDD30BEA8164B CRC64;
     MDAGRDGDGA GKAPPKGPAD ATTVPPAPVA ASAPGSSAGT SGSGEKPVKR VMKTPYQLEV
     LEYTYAVEHY PSEAKRLELS AKIGLSDRQL QMWFCHRRLK DRKPPSKRQR RDEESALAPV
     MPPPPVLPAP VMPVASSDLM VGAPGPYDKL LQPVHLRRGA GRSSAVPRIS MPDLGRRYYE
     PPPVMITPLM QLTQYELRVI NSVESQLGEP LREDGPALGI NFDPLPPGAF GAPIVPEQQK
     QPVQSYDTDI FSRHDQKLLK ASAFLPTIES PFVPNSFTGK RKSTVGNSPV VQPHVGSRAV
     HEYQFLPEQP SDTYERASPH YYDTPVEASN SRIPSLTSGS QLLHGSEEAA PSYAFQGHTS
     GSSLLPPSSR PQVFPVAPTD YEMTQFNSNL SSVPVEGQFD TSQVAAFEDP PVSSERRAYH
     DEDTSRVERK RKHNEEAKIA KEVEAHERRI RKELEKQDFL NRKREEQRHK EMERLERERR
     KEEERLLRER QREEERFQRE QRRENERMEK FLQKQSRREE KQRQKEQLRK EKEAARQKAA
     NERAAARRIA RDYMELVEDE RLELMELAAQ NKGLPSMLYL DSDTLQQLDS FRGMVSQFPP
     ATVKMKLPFS IKPWTGSEDN IGKLLMVWKF LITFTDVLGL CPVTLDEFVQ SLHDYDSRLL
     GELHVALLKS IIKDIEDVAR TPSIALGVNP GGGHPQIVEG AYSWGFDIRS WQRHLNLLTW
     PEILRQFALS AGSGPQLKKR TVEDSHYHYD NEGHDGENVI LALRNGTAAV NAVAKMKERG
     YTNRRRSRHR LTPGTVKFAA FHVLSLEGSN GLTILDVAEK IQKSGLRDLT TSKTPEASIA
     AALSRDAKLF ERTAPSTYCL KSPYRKDPAD SEAVLSAARE KIRAFQNVLS DSEAEKEADE
     AERDDDSDCD DADDDPDGDD VNIEVEEDKD PLLAVKAQDE VPSTTTVIGI KTKLDSVGNA
     LNSSSSFTKS AKGAPLPYLG RSSAADTSND SPLGGPSANH EVTPGDSENT QIDESNQIEP
     WVCALAEGDY CDLSVEERLN ALVALVGVAT EGNSIRGVLE ERLELANALK KQMWAEVQLD
     KRRFKEEFAS RVQYNSGMSF KPDIYQENNM TEITSTRACD AYKENDGHVG TINNCEMLDQ
     HSQGNAGGIT YDRNVVGQEI HATPDTSYVQ QYAYADKTRS QLKSYIGHRA EQLYVYRSLP
     LGQDRRRNRY WQFTTSASPN DPGSGRIFFE SEDGCWRVID SEDSFDSLVA ALDTRGTREA
     QLRSMLQMIE TTFKEAIKRR SASIELSATV YPKNGATDMI RANYHREVGS SSSTPFNDTS
     DSVTAYSDSF KVELGRNDFE KAAISKRADI FLKWMWRECY NQEETCAMRY GKKRCSELLH
     SCNCCYQIYL AEERHCSSCH KTFKSIYNFS DHTTQCEEKW RTDPYWKMQI ADYSVPIGMV
     LLKLQLVLIE AYIPSEALQP FWTDVYRKSW SVKLYATKSI AETFQLLTVL EGAIIPDRLS
     SDFETTNQKM ERDDGGFMKF PSRYTVVKSK QETIPLEPTG MDLYDGRWLP GSGRRGRGRG
     SRGGSRGGRG RSRGGRIPRG VSSSSRIEFK DGIAASGRAP RKNARRGRGR GRGRGRRTVR
     PRQPSVGRGR SIPKENLMGS FSMLTSSKAA DIEESPRSSG ADEWGLETRM TYTERDENSS
     GSRYEDNEEN GQPMDEDYEE QVPDYSIDYS SGSRHHEMMS MMDHETDEED EDAEGDENVE
     EDDADHAVDD ADVEMDEGDD EIGDDGEDGG VGGEMTPDED PDATSYSSDY SE
//