GenomeNet

Database: UniProt
Entry: A0A1D6HCD2_MAIZE
LinkDB: A0A1D6HCD2_MAIZE
Original site: A0A1D6HCD2_MAIZE 
ID   A0A1D6HCD2_MAIZE        Unreviewed;      1016 AA.
AC   A0A1D6HCD2;
DT   30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT   30-NOV-2016, sequence version 1.
DT   24-JAN-2024, entry version 36.
DE   SubName: Full=Embryo defective 2423 {ECO:0000313|EMBL:AQK72362.1};
GN   Name=100192364 {ECO:0000313|EnsemblPlants:Zm00001eb246300_P001};
GN   ORFNames=ZEAMMB73_Zm00001d017114 {ECO:0000313|EMBL:AQK72362.1};
OS   Zea mays (Maize).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC   Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX   NCBI_TaxID=4577 {ECO:0000313|EMBL:AQK72362.1};
RN   [1] {ECO:0000313|EnsemblPlants:Zm00001eb246300_P001, ECO:0000313|Proteomes:UP000007305}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb246300_P001,
RC   ECO:0000313|Proteomes:UP000007305};
RX   PubMed=19965430; DOI=10.1126/science.1178534;
RA   Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA   Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA   Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA   Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M.,
RA   Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B.,
RA   Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E.,
RA   Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J.,
RA   Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E.,
RA   Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A.,
RA   Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R.,
RA   Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A.,
RA   Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E.,
RA   Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A.,
RA   Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA   Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA   Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA   Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA   Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA   Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., Jeddeloh J.A.,
RA   Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C.,
RA   SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W.,
RA   Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C.,
RA   Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K.,
RA   Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K.,
RA   Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S.,
RA   Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.;
RT   "The B73 maize genome: complexity, diversity, and dynamics.";
RL   Science 326:1112-1115(2009).
RN   [2] {ECO:0000313|EMBL:AQK72362.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Seedling {ECO:0000313|EMBL:AQK72362.1};
RG   Maize Genome Sequencing Project;
RA   Ware D.;
RT   "Update maize B73 reference genome by single molecule sequencing
RT   technologies.";
RL   Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|EnsemblPlants:Zm00001eb246300_P001}
RP   IDENTIFICATION.
RC   STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb246300_P001};
RG   EnsemblPlants;
RL   Submitted (MAY-2021) to UniProtKB.
CC   -!- SIMILARITY: Belongs to the TEL2 family.
CC       {ECO:0000256|ARBA:ARBA00006133}.
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DR   EMBL; CM000781; AQK72355.1; -; Genomic_DNA.
DR   EMBL; CM000781; AQK72362.1; -; Genomic_DNA.
DR   RefSeq; NP_001296784.1; NM_001309855.1.
DR   AlphaFoldDB; A0A1D6HCD2; -.
DR   IntAct; A0A1D6HCD2; 2.
DR   STRING; 4577.A0A1D6HCD2; -.
DR   PaxDb; 4577-GRMZM2G144166_P02; -.
DR   EnsemblPlants; Zm00001eb246300_T001; Zm00001eb246300_P001; Zm00001eb246300.
DR   GeneID; 100192364; -.
DR   Gramene; Zm00001eb246300_T001; Zm00001eb246300_P001; Zm00001eb246300.
DR   KEGG; zma:100192364; -.
DR   eggNOG; KOG4346; Eukaryota.
DR   InParanoid; A0A1D6HCD2; -.
DR   OrthoDB; 318921at2759; -.
DR   Proteomes; UP000007305; Chromosome 5.
DR   ExpressionAtlas; A0A1D6HCD2; baseline and differential.
DR   GO; GO:0070209; C:ASTRA complex; IBA:GO_Central.
DR   GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR   GO; GO:0051879; F:Hsp90 protein binding; IBA:GO_Central.
DR   GO; GO:0042162; F:telomeric DNA binding; IBA:GO_Central.
DR   GO; GO:0050821; P:protein stabilization; IBA:GO_Central.
DR   GO; GO:0007004; P:telomere maintenance via telomerase; IBA:GO_Central.
DR   Gene3D; 1.25.40.720; Telomere length regulation protein 2, C-terminal domain; 1.
DR   InterPro; IPR016024; ARM-type_fold.
DR   InterPro; IPR038528; TEL2_C_sf.
DR   InterPro; IPR019337; Telomere_length_regulation_dom.
DR   PANTHER; PTHR15830; TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER; 1.
DR   PANTHER; PTHR15830:SF10; TELOMERE LENGTH REGULATION PROTEIN TEL2 HOMOLOG; 1.
DR   Pfam; PF10193; Telomere_reg-2; 1.
DR   SUPFAM; SSF48371; ARM repeat; 1.
PE   1: Evidence at protein level;
KW   Proteomics identification {ECO:0007829|PeptideAtlas:A0A1D6HCD2};
KW   Reference proteome {ECO:0000313|Proteomes:UP000007305}.
FT   DOMAIN          634..745
FT                   /note="Telomere length regulation protein conserved"
FT                   /evidence="ECO:0000259|Pfam:PF10193"
FT   REGION          543..563
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   1016 AA;  113381 MW;  E6BAEADD7F025D70 CRC64;
     MASTRSSSLP SRGATDGEKR LEALALGRVA EAADAVASAA CAGEVVRAIH AVASLLFPVD
     SEAVAGTVEE PFRSQILDAV TVTLSNEERE SWRHAFYHGP AFPTMSKILL GNVALKWLPK
     INVSARQEIY DSFFVKGPPT EVIQALVPAL SEKEFSKEDH QTFCLNLERL LILWLLDNKG
     VFQIVVDFIC SKKHGEDILS PDKTISVSRV AQLLASVPDK ARLGASAALT SPSFFKHVVS
     QLLAGAEATT IELAADKEAN EHYVLSSMFH FVGEVLSRVC RRGSTGVLVA ELIPKVRNHI
     HRCVPPDHRA TIPEMVQHVC QSQFWFNMVE AMRDQHSIER LTEELLRQLA SQHISDEEAY
     WILWTLFNQS FKRLTVMRAM FVDKFLLWKT FPLCCLRWIL HYAVFECPPN STTEILMQRT
     PNFFGILQSL VSIWSRKEFI QSYSVEQQAY ITAAIGLCLE KLTKKELETT KDVLNSILQG
     VSCRLESPID LLRKMASAVA LTFSKVVDPK NPLYLDDNCC ENVDWDFGVL SPKEFKAPLD
     AVETKTKPKT RENKKKAGEK KTKAIKRDIP DVRAKIVEIN SIDHDQMSDT ATNGQFEEEE
     CDEEDMNMDA YSDSSLEPYD LSDDDTDLQK KISHLSDLAA ALRKPDDPDG VENALNYAEK
     LVRASPDELR YNSGDLVRAL VHVRCSDVAM EGEEDSAEEK RQKALVSLLV TCPFESLDVL
     TKLLYSSSVD IGQRILIIDA MTEAAQELAE TKTVKIEQRR GNLITDTSPS WLVPSNIGPP
     GAGPWREVSE PGTLLSWSHR YEREVPSKSG QLKSGKSRKW GLGKAKDLQV EWSKNRFPLY
     AAAFMLPVMQ GYDKRSHGVD LLNRDFVVLG KLIYMLGVCM KSMAMHPEAS ALAPALLDMI
     RSRDISRHAE AYVRRSVLFA ASCILISLHP SYVASSLIEG NQDISTGLEW IRTWALQIAE
     ADPDTECSSM AMTCLRLHSE MALQTSRALE SANHSKTGRA IPSKLDSIIL PFGNMM
//
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