ID A0A1D6IQ41_MAIZE Unreviewed; 1707 AA.
AC A0A1D6IQ41;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=Clathrin heavy chain {ECO:0000256|PIRNR:PIRNR002290};
GN ORFNames=ZEAMMB73_Zm00001d023218 {ECO:0000313|EMBL:AQK38587.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:AQK38587.1};
RN [1] {ECO:0000313|EnsemblPlants:Zm00001eb404830_P001, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb404830_P001,
RC ECO:0000313|Proteomes:UP000007305};
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M.,
RA Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B.,
RA Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E.,
RA Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J.,
RA Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E.,
RA Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A.,
RA Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R.,
RA Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A.,
RA Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E.,
RA Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A.,
RA Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., Jeddeloh J.A.,
RA Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C.,
RA SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W.,
RA Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C.,
RA Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K.,
RA Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K.,
RA Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S.,
RA Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [2] {ECO:0000313|EMBL:AQK38587.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQK38587.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Zm00001eb404830_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb404830_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
CC -!- FUNCTION: Clathrin is the major protein of the polyhedral coat of
CC coated pits and vesicles. {ECO:0000256|PIRNR:PIRNR002290}.
CC -!- SUBCELLULAR LOCATION: Cytoplasmic vesicle membrane
CC {ECO:0000256|PIRNR:PIRNR002290}; Peripheral membrane protein
CC {ECO:0000256|PIRNR:PIRNR002290}; Cytoplasmic side
CC {ECO:0000256|PIRNR:PIRNR002290}. Membrane, coated pit
CC {ECO:0000256|PIRNR:PIRNR002290}; Peripheral membrane protein
CC {ECO:0000256|PIRNR:PIRNR002290}; Cytoplasmic side
CC {ECO:0000256|PIRNR:PIRNR002290}. Membrane
CC {ECO:0000256|ARBA:ARBA00004287}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004287}; Cytoplasmic side
CC {ECO:0000256|ARBA:ARBA00004287}.
CC -!- SIMILARITY: Belongs to the clathrin heavy chain family.
CC {ECO:0000256|ARBA:ARBA00009535, ECO:0000256|PIRNR:PIRNR002290}.
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DR EMBL; CM000786; AQK38510.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38512.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38514.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38516.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38538.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38544.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38546.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38553.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38555.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38560.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38563.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38564.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38576.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38585.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38587.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38591.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38592.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38595.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38606.1; -; Genomic_DNA.
DR EMBL; CM000786; AQK38609.1; -; Genomic_DNA.
DR PaxDb; 4577-GRMZM2G057576_P01; -.
DR EnsemblPlants; Zm00001eb404830_T001; Zm00001eb404830_P001; Zm00001eb404830.
DR Gramene; Zm00001eb404830_T001; Zm00001eb404830_P001; Zm00001eb404830.
DR eggNOG; KOG0985; Eukaryota.
DR OrthoDB; 5474327at2759; -.
DR Proteomes; UP000007305; Chromosome 10.
DR ExpressionAtlas; A0A1D6IQ41; baseline and differential.
DR GO; GO:0030132; C:clathrin coat of coated pit; IEA:InterPro.
DR GO; GO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro.
DR GO; GO:0071439; C:clathrin complex; IEA:InterPro.
DR GO; GO:0032051; F:clathrin light chain binding; IEA:InterPro.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0006886; P:intracellular protein transport; IEA:UniProtKB-UniRule.
DR GO; GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
DR Gene3D; 1.25.40.730; -; 1.
DR Gene3D; 2.130.10.110; Clathrin heavy-chain terminal domain; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000547; Clathrin_H-chain/VPS_repeat.
DR InterPro; IPR015348; Clathrin_H-chain_linker_core.
DR InterPro; IPR016025; Clathrin_H-chain_N.
DR InterPro; IPR022365; Clathrin_H-chain_propeller_rpt.
DR InterPro; IPR016341; Clathrin_heavy_chain.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR PANTHER; PTHR10292:SF1; CLATHRIN HEAVY CHAIN; 1.
DR PANTHER; PTHR10292; CLATHRIN HEAVY CHAIN RELATED; 1.
DR Pfam; PF00637; Clathrin; 7.
DR Pfam; PF09268; Clathrin-link; 1.
DR Pfam; PF13838; Clathrin_H_link; 1.
DR Pfam; PF01394; Clathrin_propel; 2.
DR PIRSF; PIRSF002290; Clathrin_H_chain; 1.
DR SMART; SM00299; CLH; 7.
DR SUPFAM; SSF48371; ARM repeat; 5.
DR SUPFAM; SSF50989; Clathrin heavy-chain terminal domain; 1.
DR PROSITE; PS50236; CHCR; 7.
PE 1: Evidence at protein level;
KW Coated pit {ECO:0000256|ARBA:ARBA00023176, ECO:0000256|PIRNR:PIRNR002290};
KW Cytoplasmic vesicle {ECO:0000256|ARBA:ARBA00023329,
KW ECO:0000256|PIRNR:PIRNR002290};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|PIRNR:PIRNR002290};
KW Proteomics identification {ECO:0007829|PeptideAtlas:A0A1D6IQ41};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 344..367
FT /note="Clathrin heavy chain linker core motif"
FT /evidence="ECO:0000259|Pfam:PF09268"
SQ SEQUENCE 1707 AA; 193189 MW; 4380346E5B6E0864 CRC64;
MAAANAPIAM REALTLTSLG IAPQFVTFTH VTMESEKYIC VRETSPQNSV VIIDMAMPMQ
PLRRPITADS ALMNPDARIL ALKAQIPGTT QDHLQIFNIE AKTKIKSHQM PEQVVFWKWI
TPKLLGLVTQ TSVYHWSIEG DSEPTKMFDR TANLANNQII NYRCDPAEKW LVLIGIAPGA
PERPQLVKGN MQLFSVDQQR SQALEAHAAS FATFKVVGNE NPSTLICFAS KTTNAGQITS
KLHVIELGAQ PGKPGFSKKQ ADLFFPPDFQ DDFPVAMQVS QKYGLIYVIT KLGLLFVYDL
ETAAAVYRNR ISPDPIFLTA ESSSTGGFYA INRRGQVLHA TVNDATVVPF VSGQLNNLEL
AVNLAKRANL PGAENLVVQR FQELFAQTKY KEAAELAAES PQGLLRTPET VAKFQSVPVQ
AGQTPPLLQY FGTLLTRGKL NAFESLELSR LVVNQNKKNL LENWLAEDKL ECSEELGDLV
KTVDNDLALK IYIKARATPK VVAAFAERRE FDKILIYSKQ VGYTPDYLFL LQTILRTDPQ
GAVNFALMMS QMEGGCPVDY NTITDLFLQR NMIREATAFL LDVLKPNLPD HAFLQTKVLE
INLVTYPNVA DAILANGMFS HYDRPRIAQL CEKAGLYLRA LQHYSELPDI KRVIVNTHAI
EPQALVEFFG TLSREWALEC MKDLLLVNLR GNLQIVVQAA KEYSEQLGVD ACIKLFEQFK
SYEGLYFFLG SYLSSSEDPD IHFKYIEAAA RTGQIKEVER VTRESNFYDA EKTKNFLMEA
KLPDARPLIN VCDRFGFVPD LTHYLYTNNM LRYIEGYVQK VNPGNAPLVV GQLLDDECPE
DFIKGLILSV RSLLPVEPLV DECEKRNRLR LLTQFLEHLV SEGSQDVHVH NALGKIIIDS
NNNPEHFLTT NPFYDSRVVG KYCEKRDPTL AVVAYRRGQC DDELINVTNK NSLFKLQARY
VVERMDGDLW DKVLQPENEY RRQLIDQVVS TALPESKSPE QVSAAVKAFM TADLPHELIE
LLEKIVLQNS AFSGNFNLQN LLILTAIKAD PSRVMDYVNR LDNFDGPAVG EVAVEAQLYE
EAFAIFKKFN LNVQAVDVLL DNIRSIDRAE EFAFRVEEDA VWSQVAKAQL REGLVSEAIE
SFIRADDAAH FLDVIRAAEE ANVYNDLVKY LLMVRQKARE PKVDGELIFA YAKIDRLSDI
EEFILMPNVA NLQNVGDRLY DEELYEAAKI IYAFISNWAK LAVTLVKLKQ YQGAVDAARK
ANSAKTWKEV CFACVDAEEF RLAQICGLNI IVQVDDLEEV SEYYQNRGCF SELIALMESG
LGLERAHMGI FTELGVLYAR YRSEKLMEHI KLFSTRLNIP KLIRACDEQQ HWKELTYLYI
QYDEFDNAAT TIMNHSPDAW DHMQFKDVCV KVANVELYYK AVHFYLQEHP DLINDMLNVL
ALRLDHTRVV DIMRKAGQLH LVKPYMVAVQ SNNVSAVNEA LNELYVEEED YERLRESVDM
HDNFDQIGLA QKLEKHELLE MRRIAAYIYK KAGRWKQSIA LSKKDNMYKD CMETCSQSGD
RELSEDLLVY FIEQGKKECF ASCLFICYDL IRPDVALELA WMNNMVDFAF PYLLQFIREY
TSKVDDLVKD KIESQKEERA KEKEEKDLVA QQNMYAQLLP LALPAPPMPG MGGPPPPMGG
MGMPPMGGMG MPPMGPGPMP AFGMGGY
//
