ID A0A1D6JNW6_MAIZE Unreviewed; 774 AA.
AC A0A1D6JNW6;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE SubName: Full=Transducin family protein / WD-40 repeat family protein {ECO:0000313|EMBL:ONL93720.1};
GN Name=100501489 {ECO:0000313|EnsemblPlants:Zm00001eb004160_P001};
GN ORFNames=ZEAMMB73_Zm00001d027706 {ECO:0000313|EMBL:ONL93720.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ONL93720.1};
RN [1] {ECO:0000313|EMBL:ONL93720.1, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb004160_P001,
RC ECO:0000313|Proteomes:UP000007305};
RC TISSUE=Seedling {ECO:0000313|EMBL:ONL93720.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:Zm00001eb004160_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb004160_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
CC -!- SIMILARITY: Belongs to the WD repeat WDR3/UTP12 family.
CC {ECO:0000256|ARBA:ARBA00038229}.
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DR EMBL; CM007647; ONL93720.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1D6JNW6; -.
DR EnsemblPlants; Zm00001eb004160_T001; Zm00001eb004160_P001; Zm00001eb004160.
DR Gramene; Zm00001eb004160_T001; Zm00001eb004160_P001; Zm00001eb004160.
DR Proteomes; UP000007305; Chromosome 1.
DR ExpressionAtlas; A0A1D6JNW6; baseline and differential.
DR GO; GO:0005730; C:nucleolus; IEA:UniProt.
DR CDD; cd00200; WD40; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 4.
DR InterPro; IPR007148; SSU_processome_Utp12.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19853; WD REPEAT CONTAINING PROTEIN 3 WDR3; 1.
DR PANTHER; PTHR19853:SF0; WD REPEAT-CONTAINING PROTEIN 3; 1.
DR Pfam; PF04003; Utp12; 1.
DR Pfam; PF00400; WD40; 7.
DR SMART; SM00320; WD40; 8.
DR SUPFAM; SSF50978; WD40 repeat-like; 2.
DR PROSITE; PS50082; WD_REPEATS_2; 6.
DR PROSITE; PS50294; WD_REPEATS_REGION; 3.
PE 1: Evidence at protein level;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Proteomics identification {ECO:0007829|PeptideAtlas:A0A1D6JNW6};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT REPEAT 1..22
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 23..57
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 223..263
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 404..445
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 446..487
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 488..520
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 623..724
FT /note="Small-subunit processome Utp12"
FT /evidence="ECO:0000259|Pfam:PF04003"
FT REGION 548..569
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 744..774
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 578..605
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 548..567
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 774 AA; 86962 MW; 145664A319A5482E CRC64;
MSCSKDKFIR VWDLETQHCL QIVGGHRSEI WSMDVDPSER FLVSGSADPE LQVFRIRQSV
EEGEDWSKWD VLKLFGEIPR QSKERVANVR FNRDGSLVVC QVAGKTADIY RVLDETEAAR
KAKRRVSRKK EKASAKSMIA EENGTIIDPL PVQNLQNPTV IVTDVFKLFQ VLRASKKICS
ITFSPSNPPR GCLATLSLSL NNNMLETYSV DKEKVSKMYS VEMHGHRSDI RSVSLNSEDN
LLMSTSHNAV KIWNPSTGEC LRTIDSGYGL SSAFVGNRYA LVGTKSGTLE IMDIASGSLT
EAIEAHAGSI RSIVPIPDED GTVGARGFVT GSADHDVKFW EYQLVQKSDN DSKQLTVTNV
RTLKMTEDVL AVSISPEGKH IAVALLDCHV KVFHMDTLKP SLNLYGHKLP VLCMDISSDG
ALLVTGSADK NLKIWGMDFG DCHRSIFAHS DSVMDVKFVY RTHYMFSVGK DRTMKYWDAD
KFELLLTLEG HHAEVWCLTL SSRGDFVVTG SHDRSIRRWD RTEEQLFIEE EKEKRLEETF
EADLENDNDY RYGQKDDAPD EGSVGVPGRK TKETVTSADA IMDALDTAEE ELKRINQHKM
EEQITAKAAK FQPNVIMQGH SPSDYVLNVV SSIRPNDLEQ ALLALPFSDA LKLMSYLKEW
SLVPSKVELV CRVCLVLLQT HHNQLTATPA ARSLLTELKD ILYCRVKECK DTIGFNLAAM
DHIKELLALR SDAPFRDAKA KLMEIKKEQS KRSSSRLDGD EKRKKKRKKA SAES
//
