ID A0A1D6MXS1_MAIZE Unreviewed; 818 AA.
AC A0A1D6MXS1;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=PHD finger family protein {ECO:0000313|EMBL:ONM33524.1};
GN ORFNames=ZEAMMB73_Zm00001d041708 {ECO:0000313|EMBL:ONM33524.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:ONM33524.1};
RN [1] {ECO:0000313|EMBL:ONM33524.1, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb137800_P001,
RC ECO:0000313|Proteomes:UP000007305};
RC TISSUE=Seedling {ECO:0000313|EMBL:ONM33524.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:Zm00001eb137800_P001}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb137800_P001};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
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DR EMBL; CM007649; ONM33524.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1D6MXS1; -.
DR STRING; 4577.A0A1D6MXS1; -.
DR PaxDb; 4577-GRMZM2G081350_P01; -.
DR EnsemblPlants; Zm00001eb137800_T001; Zm00001eb137800_P001; Zm00001eb137800.
DR Gramene; Zm00001eb137800_T001; Zm00001eb137800_P001; Zm00001eb137800.
DR eggNOG; KOG4443; Eukaryota.
DR InParanoid; A0A1D6MXS1; -.
DR OMA; GESCEDY; -.
DR Proteomes; UP000007305; Chromosome 3.
DR ExpressionAtlas; A0A1D6MXS1; baseline and differential.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003712; F:transcription coregulator activity; IBA:GO_Central.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IBA:GO_Central.
DR GO; GO:0045944; P:positive regulation of transcription by RNA polymerase II; IBA:GO_Central.
DR CDD; cd15489; PHD_SF; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR10615; HISTONE ACETYLTRANSFERASE; 1.
DR PANTHER; PTHR10615:SF173; PHD FINGER FAMILY PROTEIN; 1.
DR Pfam; PF00628; PHD; 2.
DR SMART; SM00249; PHD; 3.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 3.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 2.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 1: Evidence at protein level;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Proteomics identification {ECO:0007829|PeptideAtlas:A0A1D6MXS1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 134..192
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 137..190
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT DOMAIN 272..331
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT REGION 72..94
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 399..442
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 458..481
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 548..671
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 688..743
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 603..667
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 688..710
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 818 AA; 90221 MW; 79AB98263C62C09E CRC64;
MAFHVACPIT CRRVCDCELG FGAAAARKGG GGGAAAAVWA GTAAVLEGFL VDPWLLRPAG
AVDEDAATVQ VEVPPLEPDP EDGEDEARRA AAQRGAAAAE DLARRFESGA YGSPEAGEDE
DEWDREDQGN AAVKVMCRLC FSGENEGSTK AAKMLPCKLC SKRYHRNCLK SWGEHRDLFH
WSSWVCPSCR SCEVCRRPGD PNKLMFCKRC DGAYHCYCQQ PSHKNVTHGP YLCPKHTRCH
SCGSGVPGSG HSTRWFLGYT CCDACGRLFV KGNYCPICLK VYRDSEVIPM VCCDVCEKWV
HIECDGISEE KYQQFQADQN LQYTCAACRG ECSQIRDTED AIRELWKRRD VADHELMATL
RAAAALPSLE DVSPPYQNSD DEKLGAYALK NESRNTLKFS LKSNSSKPPP DTPEQEKIVF
KSSGSNKKPS KKKSGQANKT VDGHDEIFLE RRHAVKSSNS CLGDQTINEN HDRSPFKNDD
NVYVSSSTRS LEKNLKSPSM KAVANNADMI PKVKIKGSKV SSLHYKDGEE NTPKNDTGKA
TKLVIHLGSR HKTRSGSPKS ELSNSQREQD LGSIHGGKID VTSQLKSSRN EVKERSVMKL
VRDTGVQQRN SLLGDLGTSK KHATGKRSNA LISGMENANE TGTRNRSFAQ KQSHSSQVEN
HGTADSPDSL KPSLLKLKFK RPHFEQLNTQ ASQPEEPTSW VSQQEEQLNV AKGQRSKRKR
PSMEKADGLD GITPAKRHQQ STDEVMDANW ILRKLGKDAI GKRIEVHLTS DGKWHQGMVS
NVMGGTLCIR LDNGRSENVE LGKQAIRLIA SRSKGGKR
//
