ID A0A1D6NXI8_MAIZE Unreviewed; 1864 AA.
AC A0A1D6NXI8;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 24-JAN-2024, entry version 34.
DE RecName: Full=Mediator of RNA polymerase II transcription subunit 13 {ECO:0000256|ARBA:ARBA00019618, ECO:0000256|RuleBase:RU364134};
GN ORFNames=ZEAMMB73_Zm00001d045603 {ECO:0000313|EMBL:AQL02757.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:AQL02757.1};
RN [1] {ECO:0000313|EMBL:AQL02757.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQL02757.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the Mediator complex, a coactivator involved in
CC regulated transcription of nearly all RNA polymerase II-dependent
CC genes. Mediator functions as a bridge to convey information from gene-
CC specific regulatory proteins to the basal RNA polymerase II
CC transcription machinery. Mediator is recruited to promoters by direct
CC interactions with regulatory proteins and serves as a scaffold for the
CC assembly of a functional preinitiation complex with RNA polymerase II
CC and the general transcription factors. {ECO:0000256|RuleBase:RU364134}.
CC -!- SUBUNIT: Component of the Mediator complex.
CC {ECO:0000256|RuleBase:RU364134}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|RuleBase:RU364134}.
CC -!- SIMILARITY: Belongs to the Mediator complex subunit 13 family.
CC {ECO:0000256|ARBA:ARBA00009354, ECO:0000256|RuleBase:RU364134}.
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DR EMBL; CM000785; AQL02757.1; -; Genomic_DNA.
DR ExpressionAtlas; A0A1D6NXI8; baseline and differential.
DR GO; GO:0016592; C:mediator complex; IEA:InterPro.
DR GO; GO:0003712; F:transcription coregulator activity; IEA:InterPro.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR InterPro; IPR009401; Med13_C.
DR InterPro; IPR021643; Mediator_Med13_N.
DR InterPro; IPR041285; MID_MedPIWI.
DR PANTHER; PTHR48249; MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13; 1.
DR PANTHER; PTHR48249:SF3; MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13; 1.
DR Pfam; PF06333; Med13_C; 1.
DR Pfam; PF11597; Med13_N; 1.
DR Pfam; PF18296; MID_MedPIWI; 1.
PE 3: Inferred from homology;
KW Activator {ECO:0000256|RuleBase:RU364134};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|RuleBase:RU364134};
KW Repressor {ECO:0000256|ARBA:ARBA00022491, ECO:0000256|RuleBase:RU364134};
KW Transcription {ECO:0000256|ARBA:ARBA00023163,
KW ECO:0000256|RuleBase:RU364134};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015,
KW ECO:0000256|RuleBase:RU364134}.
FT DOMAIN 2..138
FT /note="Mediator complex subunit Med13 N-terminal"
FT /evidence="ECO:0000259|Pfam:PF11597"
FT DOMAIN 1049..1284
FT /note="MID"
FT /evidence="ECO:0000259|Pfam:PF18296"
FT DOMAIN 1433..1841
FT /note="Mediator complex subunit Med13 C-terminal"
FT /evidence="ECO:0000259|Pfam:PF06333"
SQ SEQUENCE 1864 AA; 202310 MW; 13B1DABE35253CF0 CRC64;
MWTNIFKIGE LQTVSWFQFL PIEPDASAAS EKSSKVEQKD ALNSIVLSAY LHLQSEGFLS
TWTNSFVGPW DPSQGEHNPD EKIKLWLFLP GCHSSVSEIA QPAVNKLRVA SNGLWVAPGN
SEEVAAALSQ ALRNSLERRA QPTVEFVFAA TEEAIFVHVV ISARYVRNLC SDDIEKVLAH
SPPSIGEGLP VVVAPSGMLG RLVGCCPSDL VRQVYSSKSL TPNLPGFSQP TVCQLRGQSY
YVEVALGFPA ASAKKVSEFE HIHIKKELDP VKDAMVGSDG QRKVESPDGL PILERTFIYP
PEAVLVPMVH QAFVRFSSKR MCLQGSLGSS SWEAWPFWNF APSSYFQNSS FLGSSCGLGV
NSNYLRLRRK KNKCNSMASS VSSVSSTSDG SQRAVATEGD IVADADSMSC RQSDMPSNND
TLGSKMVSKR PRSELTEVSS HTGKDVCENI QDPNGQVGHS WGWDDEGVVM DINILLSEFG
DFSDFFQQEE LDFGEPPGTA ESHALVIPAS DCGDVTFTDS PSTAMDIPEQ RLSPVGFTTL
DAFDHQIMAP AQDVVAKVQE PHNDTATPAQ SHSQVLSSGR FDYLTKAEAK LTFAPEYAAV
EILIAEAPTP LFTNPYFPRS KKPGSSSFSA RVYSYDVAQS SQIESTGDKP DKTSKLISGN
HLHDISSSNL YTLVQGGNKG SDKILKSTDT QPSKGELSPP ISGVTSFNFS LVSQKKSGNM
FNAGYFLLSM KTALATEIEC ITFQAAMCRI RHTLLSLRSK ASAEFNSATS SFIQTNVSNK
SDLTPRSLMD NVGVWRPVVT PKGPKSLESL SANTLTGASP SLSIQRQPVV DLLCAMTLLV
QQSTSFVDMS LDMDDGDGSF FWLSLDEQKR RGFSCDPSMV HAGCGGLLGT CHSKDCAGVD
LVDPLSAEVS EPSMISLLQS DIRVALKAAF ANMDGPLSVI DWCRGRGNAA ESAGTGDAYS
FQYSSGDILE PSSSLSIGGD SMSPPQPTSS NRGISELEFQ KGYHRVRPTI AVLPSPSMLV
GYQDDWLKAS VNSLKTWEKA PFEPYALPKP VTYYALCPDI DMLTSAVADF FMQLGTVYEV
CKLGTHSPQN NGGQMELSPG KYLPSGLVLV DCPEQLKKVR CGHLGPISST SDCLQAFSKH
WSVKSFVTSI SRILKDIKLT SNISTNQKES SSGPCTVIYV VCPFPEPCAI LQTLVECSVA
LGYVISSPER ERKLLYSQVA KALNSSASVD EASASNVVML SGFSIPKLVL QIVTIETVLR
MDKPNKELAV LKDIAFTVYN KARRIPRAVS TSDMFQSPTY LGRSQSTMMH VTSPAPTLWK
ECLVPRMSGP TLSRETDFDA SMRSATWDNS WQPARSGGLL DPSKLPDLCA QDDRKYAFEP
LFILADPGSA DLNALMEPSK SGADASGSRV YGSISGSNSD SGVSPLLDVS ESDSAASLHC
CYGWTEDWRW LVCIWTDARG ELLDSLIFPF GGISSRQDTK VLQSLFIQIL QQGCQIMSSS
PEASNMRPRD VIITRIGGFL ELEIQEWQKA IYSYGGNEVK KWPVQLRRSI PEGIPPSSNG
PTLQQQQQQD MALIQDRNMP SSPNPLYSPH PKSSFMKGAL GQSGNKKQIL VEQSGMDTSR
GSLHLVRSIS LVAVSQDHSL HLTCQADLLS RPASAGEGSQ GSSGPWSYLE GFTPVKSIGS
MSASHSYLLV PSPSMRYLSP ATLQLPTCLT SESPPLAHLL HSKGTAIPLA MGYVVSKAVP
PVRRDSAQLT KDEQPSVLSV SIIDHYGGSS GTVQEKMSRG GGGGSKQARN LSQETTGREC
EMEMHSVLEA VAAELHSLSW LTVSPVYTER RTALPFHCDM VLRMRRLLHY ADKYLSEPKG
ETTH
//