ID A0A1D6PJX2_MAIZE Unreviewed; 1494 AA.
AC A0A1D6PJX2;
DT 30-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 30-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE SubName: Full=Putative lysine-specific demethylase ELF6 {ECO:0000313|EMBL:AQL09590.1};
GN Name=100381553 {ECO:0000313|EnsemblPlants:Zm00001eb403060_P002};
GN ORFNames=ZEAMMB73_Zm00001d048404 {ECO:0000313|EMBL:AQL09590.1};
OS Zea mays (Maize).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea.
OX NCBI_TaxID=4577 {ECO:0000313|EMBL:AQL09590.1};
RN [1] {ECO:0000313|EnsemblPlants:Zm00001eb403060_P002, ECO:0000313|Proteomes:UP000007305}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb403060_P002,
RC ECO:0000313|Proteomes:UP000007305};
RX PubMed=19965430; DOI=10.1126/science.1178534;
RA Schnable P.S., Ware D., Fulton R.S., Stein J.C., Wei F., Pasternak S.,
RA Liang C., Zhang J., Fulton L., Graves T.A., Minx P., Reily A.D.,
RA Courtney L., Kruchowski S.S., Tomlinson C., Strong C., Delehaunty K.,
RA Fronick C., Courtney B., Rock S.M., Belter E., Du F., Kim K., Abbott R.M.,
RA Cotton M., Levy A., Marchetto P., Ochoa K., Jackson S.M., Gillam B.,
RA Chen W., Yan L., Higginbotham J., Cardenas M., Waligorski J., Applebaum E.,
RA Phelps L., Falcone J., Kanchi K., Thane T., Scimone A., Thane N., Henke J.,
RA Wang T., Ruppert J., Shah N., Rotter K., Hodges J., Ingenthron E.,
RA Cordes M., Kohlberg S., Sgro J., Delgado B., Mead K., Chinwalla A.,
RA Leonard S., Crouse K., Collura K., Kudrna D., Currie J., He R.,
RA Angelova A., Rajasekar S., Mueller T., Lomeli R., Scara G., Ko A.,
RA Delaney K., Wissotski M., Lopez G., Campos D., Braidotti M., Ashley E.,
RA Golser W., Kim H., Lee S., Lin J., Dujmic Z., Kim W., Talag J., Zuccolo A.,
RA Fan C., Sebastian A., Kramer M., Spiegel L., Nascimento L., Zutavern T.,
RA Miller B., Ambroise C., Muller S., Spooner W., Narechania A., Ren L.,
RA Wei S., Kumari S., Faga B., Levy M.J., McMahan L., Van Buren P.,
RA Vaughn M.W., Ying K., Yeh C.-T., Emrich S.J., Jia Y., Kalyanaraman A.,
RA Hsia A.-P., Barbazuk W.B., Baucom R.S., Brutnell T.P., Carpita N.C.,
RA Chaparro C., Chia J.-M., Deragon J.-M., Estill J.C., Fu Y., Jeddeloh J.A.,
RA Han Y., Lee H., Li P., Lisch D.R., Liu S., Liu Z., Nagel D.H., McCann M.C.,
RA SanMiguel P., Myers A.M., Nettleton D., Nguyen J., Penning B.W.,
RA Ponnala L., Schneider K.L., Schwartz D.C., Sharma A., Soderlund C.,
RA Springer N.M., Sun Q., Wang H., Waterman M., Westerman R., Wolfgruber T.K.,
RA Yang L., Yu Y., Zhang L., Zhou S., Zhu Q., Bennetzen J.L., Dawe R.K.,
RA Jiang J., Jiang N., Presting G.G., Wessler S.R., Aluru S.,
RA Martienssen R.A., Clifton S.W., McCombie W.R., Wing R.A., Wilson R.K.;
RT "The B73 maize genome: complexity, diversity, and dynamics.";
RL Science 326:1112-1115(2009).
RN [2] {ECO:0000313|EMBL:AQL09590.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Seedling {ECO:0000313|EMBL:AQL09590.1};
RG Maize Genome Sequencing Project;
RA Ware D.;
RT "Update maize B73 reference genome by single molecule sequencing
RT technologies.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|EnsemblPlants:Zm00001eb403060_P002}
RP IDENTIFICATION.
RC STRAIN=cv. B73 {ECO:0000313|EnsemblPlants:Zm00001eb403060_P002};
RG EnsemblPlants;
RL Submitted (MAY-2021) to UniProtKB.
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DR EMBL; CM000785; AQL09590.1; -; Genomic_DNA.
DR RefSeq; XP_008658772.1; XM_008660550.1.
DR EnsemblPlants; Zm00001eb403060_T002; Zm00001eb403060_P002; Zm00001eb403060.
DR GeneID; 100381553; -.
DR Gramene; Zm00001eb403060_T002; Zm00001eb403060_P002; Zm00001eb403060.
DR OrthoDB; 460721at2759; -.
DR Proteomes; UP000007305; Chromosome 9.
DR ExpressionAtlas; A0A1D6PJX2; baseline and differential.
DR GO; GO:0140993; F:histone modifying activity; IEA:UniProt.
DR GO; GO:0008168; F:methyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0032259; P:methylation; IEA:UniProtKB-KW.
DR GO; GO:0010468; P:regulation of gene expression; IEA:UniProt.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 2.
DR Gene3D; 2.60.120.650; Cupin; 1.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR036236; Znf_C2H2_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF45; LYSINE-SPECIFIC DEMETHYLASE ELF6-RELATED; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SMART; SM00355; ZnF_C2H2; 4.
DR SUPFAM; SSF57667; beta-beta-alpha zinc fingers; 2.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 3.
DR PROSITE; PS50157; ZINC_FINGER_C2H2_2; 3.
PE 1: Evidence at protein level;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Methyltransferase {ECO:0000313|EMBL:AQL09590.1};
KW Proteomics identification {ECO:0007829|PeptideAtlas:A0A1D6PJX2};
KW Reference proteome {ECO:0000313|Proteomes:UP000007305};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transferase {ECO:0000313|EMBL:AQL09590.1};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00042};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00042}.
FT DOMAIN 27..68
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 221..390
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT DOMAIN 1407..1436
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 1437..1466
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT DOMAIN 1467..1494
FT /note="C2H2-type"
FT /evidence="ECO:0000259|PROSITE:PS50157"
FT REGION 82..101
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 191..222
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 478..548
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 487..510
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 511..541
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1494 AA; 164631 MW; ED31743037F43E7D CRC64;
MSPPPAVATG GSGEPTVPAW LRGLPRAPEY RPTESEFADP IAFLSRVERE AAAYGICKVI
PPYPRPSRRF VFAHLNRSLV SSSEAANPTT ASGSSATAPS LPESAAVFTT RHQELGTPRR
GRPPPQVLKQ VWQSGERYTL DQFEAKSRAF SKIHLAGLRE PTPLEVESLF WKASADRPIY
IEYANDVPGS GFAAPKQSQR HKKRRRESDQ VEEGEKGSGW RLSGSPWNLQ AIARAPGSLT
RFMPDDVPGV TSPMVYIGML FSWFAWHVED HELHSLNFLH TGAPKTWYAV PGDRASELEE
VIRVHGYGGN PDRLASLAVL GEKTTLMSPD VLVARGVPCC RLVQYPGEFV VTFPRAYHIG
FSHGFNCGEA ANFATPQWLK FAKEAAVRRA VMNYLPMLSH QQLLYLLAVS FITRTPNVLS
GIRSRLRDRK KEERELLVKQ EFLQDMISEN KLLCSFLEKK SIRHVVLWEP DLLPSSTALH
SCSSGSKAPE KKSEDGCRIE SSERGTKDNS SDGSAHMIGA QTKFMSGNSK SSGTASASMD
EVNADTDDED DLPFDLSIDS GSLTCVACGI LGYPFMAILQ PSREVLEGIS LAHTSRYKMS
SEKDNCSNTI PCCPTDRCSF VPSRPSWPAE QQCLATPLGQ ANISHQNVNS HKDVCLRENE
PNGPVPQCNN ISHSCRSENT LHSCSDRGKS ENKISEDSLG PEVGEQTGKY VINAQAAESS
DGTINWNTYC TFARPRIFCL QHALEIEKLL EGKGGVHGLI ICHSDFVKLK ALAISVAEEI
EFQFDCTDIS LAKASKSDLH LINISIDDEG HEEDGRDWTS QMGLNLKYSA KLRKEKSENQ
EQSPLPFGGL LSCPSPVSVV PNLKWLCKRA RTPYTVIGTM RGSSATATAA ELKPGVKTEI
FTNGNVCEDD NRHHSFRQTG LEQPGGLQDC DKPSCSEENG HGRHCLVNIP IAVAEYPMMH
QVREGPVSVS TCNDSICLSG SLDLPPHASP VEVTRYLGCI QSTELSSLPA FSVQHFFNDE
STSVEGSIDC VSNGCLESQD DILGSRDERL QVQQYQEKMG LRNNPNMKSV DSHLIEGLAV
SEGKHGETVA AFLENKERCA KTSYCSNTET KTTKSAIDNR LETHHLGTGP VKLNSSFNEM
HSADRQCSLV FGCLDSADVP ASTQALSVSP VLMSDEQQVD DAHSAVKAIE HLGNNLANIK
HKSLHMDVLM LEDAQVASMA AVPGHEGESV EAGSNSFDIL LGALAEESKA ADAPGKDEVG
KASLTLITLA SNEPSVTEGR VVDVVETDTI LGAGKDDKQL DQPHGFHLSD LVSRCIGSSN
RSDIICYVRR KHKRKRDYSC FVRSPCESLR PRSKPAVVEE SEWSRTAEAS FAKRGKRTQA
VGSFQCDIDL CDMAFETRAE LNAHKRNICT DESCGKRFSS HKYLKRHQCV HSEMRPFKCP
WEGCKMTFKW LWAQTEHVRV HTGERPYKCS APDCGQTFRY VSDYSRHRKK FNHY
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