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Database: UniProt
Entry: A0A1D7SDF5_9CAUD
LinkDB: A0A1D7SDF5_9CAUD
Original site: A0A1D7SDF5_9CAUD 
ID   A0A1D7SDF5_9CAUD        Unreviewed;       359 AA.
AC   A0A1D7SDF5;
DT   18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT   18-JAN-2017, sequence version 1.
DT   24-JAN-2024, entry version 29.
DE   SubName: Full=Photosystem II protein D1 {ECO:0000313|EMBL:AOO11696.1};
GN   ORFNames=ES420910_219 {ECO:0000313|EMBL:AOO11696.1}, Np200711_220
GN   {ECO:0000313|EMBL:AOO12162.1}, Np420711_219
GN   {ECO:0000313|EMBL:AOO12397.1}, Sn130910_219
GN   {ECO:0000313|EMBL:AOO12862.1};
OS   Cyanophage S-RIM44.
OC   Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC   Kyanoviridae; Vellamovirus; Vellamovirus rhodeisland44.
OX   NCBI_TaxID=1278485 {ECO:0000313|EMBL:AOO11696.1, ECO:0000313|Proteomes:UP000225178};
RN   [1] {ECO:0000313|Proteomes:UP000221709, ECO:0000313|Proteomes:UP000223571}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ES_42_0910 {ECO:0000313|EMBL:AOO11696.1}, Np_20_0711
RC   {ECO:0000313|EMBL:AOO12162.1}, Np_42_0711
RC   {ECO:0000313|EMBL:AOO12397.1}, and Sn_13_0910
RC   {ECO:0000313|EMBL:AOO12862.1};
RX   PubMed=27696643; DOI=10.1111/1462-2920.13556;
RA   Marston M.F., Martiny J.B.;
RT   "Genomic diversification of marine cyanophages into stable ecotypes.";
RL   Environ. Microbiol. 18:4240-4253(2016).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC       pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC   -!- SIMILARITY: Belongs to the reaction center PufL/M/PsbA/D family.
CC       {ECO:0000256|ARBA:ARBA00008204}.
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DR   EMBL; KX349291; AOO11696.1; -; Genomic_DNA.
DR   EMBL; KX349293; AOO12162.1; -; Genomic_DNA.
DR   EMBL; KX349294; AOO12397.1; -; Genomic_DNA.
DR   EMBL; KX349296; AOO12862.1; -; Genomic_DNA.
DR   Proteomes; UP000221709; Genome.
DR   Proteomes; UP000223571; Genome.
DR   Proteomes; UP000225178; Genome.
DR   Proteomes; UP000226130; Genome.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0016168; F:chlorophyll binding; IEA:UniProtKB-KW.
DR   GO; GO:0045156; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0009772; P:photosynthetic electron transport in photosystem II; IEA:InterPro.
DR   GO; GO:0009635; P:response to herbicide; IEA:UniProtKB-KW.
DR   Gene3D; 1.20.85.10; Photosystem II protein D1-like; 1.
DR   HAMAP; MF_01379; PSII_PsbA_D1; 1.
DR   InterPro; IPR036854; Photo_II_D1/D2_sf.
DR   InterPro; IPR000484; Photo_RC_L/M.
DR   InterPro; IPR005867; PSII_D1.
DR   NCBIfam; TIGR01151; psbA; 1.
DR   PANTHER; PTHR33149:SF12; PHOTOSYSTEM II D2 PROTEIN; 1.
DR   PANTHER; PTHR33149; PHOTOSYSTEM II PROTEIN D1; 1.
DR   Pfam; PF00124; Photo_RC; 1.
DR   PRINTS; PR00256; REACTNCENTRE.
DR   SUPFAM; SSF81483; Bacterial photosystem II reaction centre, L and M subunits; 1.
DR   PROSITE; PS00244; REACTION_CENTER; 1.
PE   3: Inferred from homology;
KW   Calcium {ECO:0000256|ARBA:ARBA00022837};
KW   Chlorophyll {ECO:0000256|ARBA:ARBA00022494};
KW   Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW   Herbicide resistance {ECO:0000256|ARBA:ARBA00022646};
KW   Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW   Manganese {ECO:0000256|ARBA:ARBA00023211};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Photosynthesis {ECO:0000256|ARBA:ARBA00022531};
KW   Reference proteome {ECO:0000313|Proteomes:UP000223571};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        29..55
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        109..127
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        139..161
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        197..218
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        273..295
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
SQ   SEQUENCE   359 AA;  39424 MW;  03A64B396817338B CRC64;
     MASTLSRQQS TSSWEQFCEW VTSTNNRLYV GWFGVLMIPT LLAATICFIV AFVAAPPVDI
     DGIREPVAGS LMYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PFQLVVFHFL
     IGIYAYMGRE WELSYRLGMR PWICVAYSAP VAAASAVFLV YPFGQGSFSD AMPLGISGTF
     NYMLVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTET ESQNYGYKFG
     QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV VGIWFTALGV STMAFNLNGF
     NFNQSILDGQ GRVLNTWADV LNRAGLGMEV MHERNAHNFP LDLAAAESTP VALVAPSVG
//
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