ID A0A1D7SDF5_9CAUD Unreviewed; 359 AA.
AC A0A1D7SDF5;
DT 18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT 18-JAN-2017, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE SubName: Full=Photosystem II protein D1 {ECO:0000313|EMBL:AOO11696.1};
GN ORFNames=ES420910_219 {ECO:0000313|EMBL:AOO11696.1}, Np200711_220
GN {ECO:0000313|EMBL:AOO12162.1}, Np420711_219
GN {ECO:0000313|EMBL:AOO12397.1}, Sn130910_219
GN {ECO:0000313|EMBL:AOO12862.1};
OS Cyanophage S-RIM44.
OC Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes;
OC Kyanoviridae; Vellamovirus; Vellamovirus rhodeisland44.
OX NCBI_TaxID=1278485 {ECO:0000313|EMBL:AOO11696.1, ECO:0000313|Proteomes:UP000225178};
RN [1] {ECO:0000313|Proteomes:UP000221709, ECO:0000313|Proteomes:UP000223571}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ES_42_0910 {ECO:0000313|EMBL:AOO11696.1}, Np_20_0711
RC {ECO:0000313|EMBL:AOO12162.1}, Np_42_0711
RC {ECO:0000313|EMBL:AOO12397.1}, and Sn_13_0910
RC {ECO:0000313|EMBL:AOO12862.1};
RX PubMed=27696643; DOI=10.1111/1462-2920.13556;
RA Marston M.F., Martiny J.B.;
RT "Genomic diversification of marine cyanophages into stable ecotypes.";
RL Environ. Microbiol. 18:4240-4253(2016).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- SIMILARITY: Belongs to the reaction center PufL/M/PsbA/D family.
CC {ECO:0000256|ARBA:ARBA00008204}.
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DR EMBL; KX349291; AOO11696.1; -; Genomic_DNA.
DR EMBL; KX349293; AOO12162.1; -; Genomic_DNA.
DR EMBL; KX349294; AOO12397.1; -; Genomic_DNA.
DR EMBL; KX349296; AOO12862.1; -; Genomic_DNA.
DR Proteomes; UP000221709; Genome.
DR Proteomes; UP000223571; Genome.
DR Proteomes; UP000225178; Genome.
DR Proteomes; UP000226130; Genome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0016168; F:chlorophyll binding; IEA:UniProtKB-KW.
DR GO; GO:0045156; F:electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0009772; P:photosynthetic electron transport in photosystem II; IEA:InterPro.
DR GO; GO:0009635; P:response to herbicide; IEA:UniProtKB-KW.
DR Gene3D; 1.20.85.10; Photosystem II protein D1-like; 1.
DR HAMAP; MF_01379; PSII_PsbA_D1; 1.
DR InterPro; IPR036854; Photo_II_D1/D2_sf.
DR InterPro; IPR000484; Photo_RC_L/M.
DR InterPro; IPR005867; PSII_D1.
DR NCBIfam; TIGR01151; psbA; 1.
DR PANTHER; PTHR33149:SF12; PHOTOSYSTEM II D2 PROTEIN; 1.
DR PANTHER; PTHR33149; PHOTOSYSTEM II PROTEIN D1; 1.
DR Pfam; PF00124; Photo_RC; 1.
DR PRINTS; PR00256; REACTNCENTRE.
DR SUPFAM; SSF81483; Bacterial photosystem II reaction centre, L and M subunits; 1.
DR PROSITE; PS00244; REACTION_CENTER; 1.
PE 3: Inferred from homology;
KW Calcium {ECO:0000256|ARBA:ARBA00022837};
KW Chlorophyll {ECO:0000256|ARBA:ARBA00022494};
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Herbicide resistance {ECO:0000256|ARBA:ARBA00022646};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Manganese {ECO:0000256|ARBA:ARBA00023211};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Photosynthesis {ECO:0000256|ARBA:ARBA00022531};
KW Reference proteome {ECO:0000313|Proteomes:UP000223571};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}.
FT TRANSMEM 29..55
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 109..127
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 139..161
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 197..218
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 273..295
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 359 AA; 39424 MW; 03A64B396817338B CRC64;
MASTLSRQQS TSSWEQFCEW VTSTNNRLYV GWFGVLMIPT LLAATICFIV AFVAAPPVDI
DGIREPVAGS LMYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PFQLVVFHFL
IGIYAYMGRE WELSYRLGMR PWICVAYSAP VAAASAVFLV YPFGQGSFSD AMPLGISGTF
NYMLVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTET ESQNYGYKFG
QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV VGIWFTALGV STMAFNLNGF
NFNQSILDGQ GRVLNTWADV LNRAGLGMEV MHERNAHNFP LDLAAAESTP VALVAPSVG
//