ID A0A1D7XJS9_9CLOT Unreviewed; 632 AA.
AC A0A1D7XJS9;
DT 18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT 18-JAN-2017, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=Sigma-54-dependent Fis family transcriptional regulator {ECO:0000313|EMBL:AOR23604.1};
GN ORFNames=BGI42_07600 {ECO:0000313|EMBL:AOR23604.1};
OS Clostridium taeniosporum.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=394958 {ECO:0000313|EMBL:AOR23604.1, ECO:0000313|Proteomes:UP000094652};
RN [1] {ECO:0000313|Proteomes:UP000094652}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=1/k {ECO:0000313|Proteomes:UP000094652};
RA Walker J.R.;
RT "Genomics of Clostridium taeniosporum, an organism which forms endospores
RT with ribbon-like appendages.";
RL Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP017253; AOR23604.1; -; Genomic_DNA.
DR RefSeq; WP_069679755.1; NZ_CP017253.2.
DR AlphaFoldDB; A0A1D7XJS9; -.
DR STRING; 394958.BGI42_07600; -.
DR KEGG; ctae:BGI42_07600; -.
DR OrthoDB; 9803970at2; -.
DR Proteomes; UP000094652; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR32071:SF119; SIGMA-54 INTERACTING PROTEIN; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF13426; PAS_9; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000094652};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 197..243
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 324..554
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 632 AA; 72075 MW; B927F9AC44987FEE CRC64;
MLEENTYQEI LNRSYERCIK YGVEKNIHYP SRILKKKELN ILMRKNFQLI NIAKPFMEIL
YDFLRGSGFS LYLTDEDGVV LTIIGDEDII RDQIKVGIIE GTDMSEKSAG TNGIGTALYE
DCSVQILGEE HFIKIFHIWT CSSAVIHNEG KDIIGCLNLT GRRQLAHAHT LGLVVAAVKS
IENHLKFERT QKELFKAHQY LNRVMNSLNL GIFAVDIEGI VKAINNSACD MLNIKENDVI
NKNVNSVLSN WEEIFDHLKN GRTYEDIEIV YSNKKKRFNL NVYPIKDKEK NINGMVCIFK
DIKNVYNLVN KYTGRTAQYT FTDIIGKSEQ IIKLKKQAQS ISNSPSTVLI QGESGTGKEL
IAQSIHNNSD RRNYSFVAIN CGAIPKSLIE SELFGYEEGA FTGAKRGGCA GKFELANKGT
LFLDEIGEMP LDMQINLLRV LQEGCITRIG GNKCINVNVR IIAATNKNLK NEVEKGTFRE
DLYYRLSVIP IYVPPLRERT GDIEILIEHF LKIKSLKLGK SIPNLNKNLY KKLLNYDWPG
NIRELENCIE NIVNMDGDTY FSFENKKTVK EKKNHSNIEL QYNMCSLKEL EEKAINICLN
NYNGNISKSC KVLGINRSTL YAKIKKYNIK FR
//
