ID A0A1D8P8Z0_9FLAO Unreviewed; 330 AA.
AC A0A1D8P8Z0;
DT 18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT 18-JAN-2017, sequence version 1.
DT 24-JAN-2024, entry version 16.
DE RecName: Full=glycerophosphodiester phosphodiesterase {ECO:0000256|ARBA:ARBA00012247};
DE EC=3.1.4.46 {ECO:0000256|ARBA:ARBA00012247};
GN ORFNames=LPB138_10085 {ECO:0000313|EMBL:AOW21005.1};
OS Urechidicola croceus.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Urechidicola.
OX NCBI_TaxID=1850246 {ECO:0000313|EMBL:AOW21005.1, ECO:0000313|Proteomes:UP000176050};
RN [1] {ECO:0000313|EMBL:AOW21005.1, ECO:0000313|Proteomes:UP000176050}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LPB0138 {ECO:0000313|EMBL:AOW21005.1,
RC ECO:0000313|Proteomes:UP000176050};
RA Kim E., Yi H.;
RT "Lutibacter sp. LPB0138, isolated from marine gastropod.";
RL Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=a sn-glycero-3-phosphodiester + H2O = an alcohol + H(+) + sn-
CC glycerol 3-phosphate; Xref=Rhea:RHEA:12969, ChEBI:CHEBI:15377,
CC ChEBI:CHEBI:15378, ChEBI:CHEBI:30879, ChEBI:CHEBI:57597,
CC ChEBI:CHEBI:83408; EC=3.1.4.46;
CC Evidence={ECO:0000256|ARBA:ARBA00029315};
CC -!- SIMILARITY: Belongs to the glycerophosphoryl diester phosphodiesterase
CC family. {ECO:0000256|ARBA:ARBA00007277}.
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DR EMBL; CP017478; AOW21005.1; -; Genomic_DNA.
DR RefSeq; WP_070237169.1; NZ_CP017478.1.
DR AlphaFoldDB; A0A1D8P8Z0; -.
DR STRING; 1850246.LPB138_10085; -.
DR KEGG; lul:LPB138_10085; -.
DR OrthoDB; 384721at2; -.
DR Proteomes; UP000176050; Chromosome.
DR GO; GO:0008081; F:phosphoric diester hydrolase activity; IEA:InterPro.
DR GO; GO:0006629; P:lipid metabolic process; IEA:InterPro.
DR Gene3D; 3.20.20.190; Phosphatidylinositol (PI) phosphodiesterase; 1.
DR InterPro; IPR030395; GP_PDE_dom.
DR InterPro; IPR017946; PLC-like_Pdiesterase_TIM-brl.
DR PANTHER; PTHR43620:SF7; GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPD5-RELATED; 1.
DR PANTHER; PTHR43620; GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE; 1.
DR Pfam; PF03009; GDPD; 1.
DR SUPFAM; SSF51695; PLC-like phosphodiesterases; 1.
DR PROSITE; PS51704; GP_PDE; 1.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Reference proteome {ECO:0000313|Proteomes:UP000176050};
KW Signal {ECO:0000256|ARBA:ARBA00022729}.
FT DOMAIN 31..326
FT /note="GP-PDE"
FT /evidence="ECO:0000259|PROSITE:PS51704"
SQ SEQUENCE 330 AA; 38331 MW; B3574B7CB939C6E4 CRC64;
MLNRLLLISV LIMTVGCTNP KTTISKMNTH KIVIAHRGAS GYLPEHTLEA KAMAHAMKPD
YLEQDIVLSK DGFPVVFHDI YLDEITDVKS KFPKRKRIDD RYYVIDFTLE ELRQLELIDR
INVETGKFLY PYRYPTNRSS FKIHTLEEEI VMIQGMNYST GKDIGIYPEI KEPAFHRKEG
QDISVIVLEI LRTYGYETIS DNCILQCFDP VELKRIREDL NSELFLVQLM EGDYKESFLK
EVRTYANGIG PWYKEILNGK DSEGKWQFSS LVRDAQELDL VVHAYTFRSD DLGEFKSFNE
LLNVGFNEMN LDGVFTDFPD KAVEFLESKK
//