ID A0A1D8YFI4_9GAMM Unreviewed; 312 AA.
AC A0A1D8YFI4;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Exodeoxyribonuclease IX {ECO:0000313|EMBL:AOX64323.1};
GN ORFNames=BIZ42_12780 {ECO:0000313|EMBL:AOX64323.1};
OS Stenotrophomonas sp. LM091.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Stenotrophomonas.
OX NCBI_TaxID=1904944 {ECO:0000313|EMBL:AOX64323.1, ECO:0000313|Proteomes:UP000177427};
RN [1] {ECO:0000313|EMBL:AOX64323.1, ECO:0000313|Proteomes:UP000177427}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LM091 {ECO:0000313|EMBL:AOX64323.1,
RC ECO:0000313|Proteomes:UP000177427};
RA Lefeuvre P.;
RT "Complete genome sequence of a copper-resistant commensal bacteria:
RT Stenotrophomonas sp. strain LM091.";
RL Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP017483; AOX64323.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1D8YFI4; -.
DR STRING; 1904944.BIZ42_12780; -.
DR KEGG; slm:BIZ42_12780; -.
DR OrthoDB; 9806424at2; -.
DR Proteomes; UP000177427; Chromosome.
DR GO; GO:0017108; F:5'-flap endonuclease activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0033567; P:DNA replication, Okazaki fragment processing; IEA:InterPro.
DR CDD; cd09898; H3TH_53EXO; 1.
DR CDD; cd09859; PIN_53EXO; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR InterPro; IPR020046; 5-3_exonucl_a-hlix_arch_N.
DR InterPro; IPR002421; 5-3_exonuclease.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR020045; DNA_polI_H3TH.
DR InterPro; IPR038969; FEN.
DR InterPro; IPR008918; HhH2.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR PANTHER; PTHR42646:SF2; DNA-DIRECTED DNA POLYMERASE; 1.
DR PANTHER; PTHR42646; FLAP ENDONUCLEASE XNI; 1.
DR Pfam; PF01367; 5_3_exonuc; 1.
DR Pfam; PF02739; 5_3_exonuc_N; 1.
DR SMART; SM00475; 53EXOc; 1.
DR SMART; SM00279; HhH2; 1.
DR SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125}.
FT DOMAIN 8..271
FT /note="5'-3' exonuclease"
FT /evidence="ECO:0000259|SMART:SM00475"
SQ SEQUENCE 312 AA; 34489 MW; F29E87ABA9802CB1 CRC64;
MPPPPLRAPL YLVDASLYVF RAWHSMPDEF QDQQGWPTNA VHGFARFLLD LLERERPANI
AIAFDEALDS CFRHRIYAAY KANRDPAPDA LRRQFAHCKA LCTALGLAVL AHHEYEADDL
IGSALHARRD AGMRGVIISA DKDLSQLLFE HDEQWDYARN QRWGMAGVKA RHGVHAHQIA
DYLALCGDAV DNIPGVTGVG AKSAAVLLAH FGSLDVLYER LDEVPFLRLR GAAQMAVRLR
EQREHALLWR QLTTIALDAP LEGAAADFSR GVADAQMLQG LCDALRFGPL TRRRLFAAAG
LSDSSSVASE FA
//
