ID A0A1E3XEC1_9BACT Unreviewed; 168 AA.
AC A0A1E3XEC1;
DT 18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT 18-JAN-2017, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=RNA polymerase sigma factor RpoD {ECO:0000313|EMBL:ODS33973.1};
GN ORFNames=SCARUB_00844 {ECO:0000313|EMBL:ODS33973.1};
OS Candidatus Scalindua rubra.
OC Bacteria; Planctomycetota; Candidatus Brocadiia; Candidatus Brocadiales;
OC Candidatus Scalinduaceae; Scalindua.
OX NCBI_TaxID=1872076 {ECO:0000313|EMBL:ODS33973.1, ECO:0000313|Proteomes:UP000094056};
RN [1] {ECO:0000313|EMBL:ODS33973.1, ECO:0000313|Proteomes:UP000094056}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BSI-1 {ECO:0000313|EMBL:ODS33973.1};
RA Speth D.R., Lagkouvardos I., Wang Y., Qian P.-Y., Dutilh B.E., Jetten M.S.;
RT "Draft genome of Scalindua rubra, obtained from a brine-seawater interface
RT in the Red Sea, sheds light on salt adaptation in anammox bacteria.";
RL Submitted (JUL-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ODS33973.1}.
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DR EMBL; MAYW01000015; ODS33973.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1E3XEC1; -.
DR Proteomes; UP000094056; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF47; RNA POLYMERASE SIGMA FACTOR SIGF, CHLOROPLASTIC; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000094056}.
FT DOMAIN 19..73
FT /note="RNA polymerase sigma-70 region 3"
FT /evidence="ECO:0000259|Pfam:PF04539"
FT DOMAIN 109..160
FT /note="RNA polymerase sigma-70 region 4"
FT /evidence="ECO:0000259|Pfam:PF04545"
SQ SEQUENCE 168 AA; 19753 MW; 9D526F5AD92F316C CRC64;
MRGITNTAKT IRIPSHMVEK ISKLKKFSEK LSNKLERKPS LKEIAKEMDI TAHRVELIEK
AIKSTYLLDE DIAGADIIWT LSNMLIDERN KYPVERMIDT YEKEKLKDLL QVINKREADI
LRMRYGLDNG EPMKLKDIGK RFNISKERVR QIEKAALHKL NYIVKKEE
//
