ID A0A1E4ID93_9PSEU Unreviewed; 584 AA.
AC A0A1E4ID93;
DT 18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT 18-JAN-2017, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=Sigma-54 factor interaction domain-containing protein {ECO:0000259|PROSITE:PS50045};
GN ORFNames=ABS81_00275 {ECO:0000313|EMBL:ODU07583.1};
OS Pseudonocardia sp. SCN 72-86.
OC Bacteria; Actinomycetota; Actinomycetes; Pseudonocardiales;
OC Pseudonocardiaceae; Pseudonocardia.
OX NCBI_TaxID=1660131 {ECO:0000313|EMBL:ODU07583.1, ECO:0000313|Proteomes:UP000094542};
RN [1] {ECO:0000313|EMBL:ODU07583.1, ECO:0000313|Proteomes:UP000094542}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=26031303; DOI=10.1111/1462-2920.12936;
RA Kantor R.S., van Zyl A.W., van Hille R.P., Thomas B.C., Harrison S.T.,
RA Banfield J.F.;
RT "Bioreactor microbial ecosystems for thiocyanate and cyanide degradation
RT unravelled with genome-resolved metagenomics.";
RL Environ. Microbiol. 17:4929-4941(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ODU07583.1}.
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DR EMBL; MEFA01000001; ODU07583.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1E4ID93; -.
DR Proteomes; UP000094542; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF95; TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR; 1.
DR Pfam; PF02954; HTH_8; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 307..503
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 584 AA; 63367 MW; D488CFF4EDFCBF9F CRC64;
MSTTYARQLR SARDEFVVTG QVPERYRAAV RPEIAASWAR SRSSGASPEE VHLPALPEID
QESELAVVAG RVLDRLAAEI DDLGGAVFLA NSQAQLVRSW IPDEMVRTSL RRILAEPGAS
CNEAHVGTNG IGTALADGQT KIIGGPEHWG ELHQDMTCVA APILHPVTRR PAGVLNVTLM
DQQIHPALTA LVRWGVEEIR QGLLERTGRA ERVLFEQFMA RRRTDRPSLL LSPRLCIADP
AAAELLPDLD AAELWDQMNR SRGPGGVTEL ELADGAVVPV SVTQVDEGLL IEVRRQGRPP
RRRSTARPGP SAAYAAAAEA GADAVASGLP LLIVGEPGTG KLTLARRLTD CDPDLDPIVT
VDCRTVGDRP EQWVEDLRTV GEGARVLVLH HLDRFGMRGA RLLAPVLEGL AARPSAPRLI
ATATDRALQQ DVLDTVFGRF AVATVEVPPL RDRAADLSSL VSALTSALDR RARWSAEALE
VLGRRSWPGN VRELENVVAR TLSNSGGLIR VADLPLDVRQ EAGRRSLTRM ERAERDAIMA
ALENSRGNKV IAAEELGISR SSLYRKIERY GLADAGQVEI RLRS
//
