ID A0A1E4S4J5_CYBJN Unreviewed; 223 AA.
AC A0A1E4S4J5;
DT 18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT 18-JAN-2017, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=RNA-binding domain-containing protein {ECO:0000313|EMBL:ODV74449.1};
GN ORFNames=CYBJADRAFT_167113 {ECO:0000313|EMBL:ODV74449.1};
OS Cyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617
OS / NBRC 0987 / NRRL Y-1542) (Torula yeast) (Candida utilis).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Phaffomycetaceae; Cyberlindnera.
OX NCBI_TaxID=983966 {ECO:0000313|EMBL:ODV74449.1, ECO:0000313|Proteomes:UP000094389};
RN [1] {ECO:0000313|EMBL:ODV74449.1, ECO:0000313|Proteomes:UP000094389}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617 / NBRC 0987 /
RC NRRL Y-1542 {ECO:0000313|Proteomes:UP000094389};
RX PubMed=27535936; DOI=10.1073/pnas.1603941113;
RA Riley R., Haridas S., Wolfe K.H., Lopes M.R., Hittinger C.T., Goeker M.,
RA Salamov A.A., Wisecaver J.H., Long T.M., Calvey C.H., Aerts A.L.,
RA Barry K.W., Choi C., Clum A., Coughlan A.Y., Deshpande S., Douglass A.P.,
RA Hanson S.J., Klenk H.-P., LaButti K.M., Lapidus A., Lindquist E.A.,
RA Lipzen A.M., Meier-Kolthoff J.P., Ohm R.A., Otillar R.P., Pangilinan J.L.,
RA Peng Y., Rokas A., Rosa C.A., Scheuner C., Sibirny A.A., Slot J.C.,
RA Stielow J.B., Sun H., Kurtzman C.P., Blackwell M., Grigoriev I.V.,
RA Jeffries T.W.;
RT "Comparative genomics of biotechnologically important yeasts.";
RL Proc. Natl. Acad. Sci. U.S.A. 113:9882-9887(2016).
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DR EMBL; KV453928; ODV74449.1; -; Genomic_DNA.
DR RefSeq; XP_020071488.1; XM_020214776.1.
DR AlphaFoldDB; A0A1E4S4J5; -.
DR STRING; 983966.A0A1E4S4J5; -.
DR GeneID; 30989172; -.
DR OMA; PMEQFIK; -.
DR OrthoDB; 168812at2759; -.
DR Proteomes; UP000094389; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR CDD; cd12411; RRM_ist3_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR024767; PRP38_C.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR045844; RRM_Ist3-like.
DR PANTHER; PTHR45880; RNA-BINDING MOTIF PROTEIN, X-LINKED 2; 1.
DR PANTHER; PTHR45880:SF1; RNA-BINDING MOTIF PROTEIN, X-LINKED 2; 1.
DR Pfam; PF12871; PRP38_assoc; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000094389};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 33..111
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 127..223
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 130..148
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 149..223
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 223 AA; 26888 MW; 3001DC5BA64C2FBA CRC64;
MNQIRQISRL NEEELQRSIP FSASWHQQYK DSAYINFGGL PYELSEGDVL VIFSQYGIPV
HMKLVRDKES GKSRGFGWLK YEDQLSTVLA VDNLNGAKVL GRTIRVDHAF YEEKDVDEEY
ERLLAEELSN DMASEEDEVE EERDVKEDEF EDPLLLMKRQ ESGNRRSHRE RHGHRERDRD
RDRDRDRDRD RDRDRDRDRD RDRDRDRDRD RDRDSRKTTT RPK
//
