ID   A0A1E4TWT5_PACTA        Unreviewed;      1254 AA.
AC   A0A1E4TWT5;
DT   18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT   18-JAN-2017, sequence version 1.
DT   27-MAR-2024, entry version 23.
DE   RecName: Full=Pre-mRNA-splicing factor RSE1 {ECO:0000256|ARBA:ARBA00040134};
GN   ORFNames=PACTADRAFT_49605 {ECO:0000313|EMBL:ODV96220.1};
OS   Pachysolen tannophilus NRRL Y-2460.
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Saccharomycetales incertae sedis; Pachysolen.
OX   NCBI_TaxID=669874 {ECO:0000313|EMBL:ODV96220.1, ECO:0000313|Proteomes:UP000094236};
RN   [1] {ECO:0000313|Proteomes:UP000094236}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=NRRL Y-2460 {ECO:0000313|Proteomes:UP000094236};
RG   DOE Joint Genome Institute;
RA   Riley R., Haridas S., Wolfe K.H., Lopes M.R., Hittinger C.T., Goker M.,
RA   Salamov A., Wisecaver J., Long T.M., Aerts A.L., Barry K., Choi C.,
RA   Clum A., Coughlan A.Y., Deshpande S., Douglass A.P., Hanson S.J.,
RA   Klenk H.-P., Labutti K., Lapidus A., Lindquist E., Lipzen A.,
RA   Meier-Kolthoff J.P., Ohm R.A., Otillar R.P., Pangilinan J., Peng Y.,
RA   Rokas A., Rosa C.A., Scheuner C., Sibirny A.A., Slot J.C., Stielow J.B.,
RA   Sun H., Kurtzman C.P., Blackwell M., Grigoriev I.V., Jeffries T.W.;
RT   "Comparative genomics of biotechnologically important yeasts.";
RL   Submitted (MAY-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the RSE1 family.
CC       {ECO:0000256|ARBA:ARBA00038266}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KV454013; ODV96220.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A1E4TWT5; -.
DR   STRING; 669874.A0A1E4TWT5; -.
DR   OrthoDB; 101343at2759; -.
DR   Proteomes; UP000094236; Unassembled WGS sequence.
DR   GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 3.
DR   InterPro; IPR004871; Cleavage/polyA-sp_fac_asu_C.
DR   InterPro; IPR018846; Cleavage/polyA-sp_fac_asu_N.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   PANTHER; PTHR10644; DNA REPAIR/RNA PROCESSING CPSF FAMILY; 1.
DR   PANTHER; PTHR10644:SF1; SPLICING FACTOR 3B SUBUNIT 3; 1.
DR   Pfam; PF03178; CPSF_A; 1.
DR   Pfam; PF10433; MMS1_N; 1.
PE   3: Inferred from homology;
KW   mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW   mRNA splicing {ECO:0000256|ARBA:ARBA00022728};
KW   Reference proteome {ECO:0000313|Proteomes:UP000094236};
KW   Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
FT   DOMAIN          91..620
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF10433"
FT   DOMAIN          888..1220
FT                   /note="Cleavage/polyadenylation specificity factor A
FT                   subunit C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03178"
SQ   SEQUENCE   1254 AA;  141049 MW;  AAFA5E826EF66A6C CRC64;
     MSSMDPELYL YNLTLNKPFA SIGSIVGYFT NVDKNSQKKR KYQELIIATN SSLHLYRLNP
     NEGKLIKILE HDCFSVIRAI DVFRVPGGSK DCVVLTSDSG NLTLLTLNQS NTKFEIIHNE
     PYAKTGLRRI TPGEYISVDG KNRAMMISAI EKNKLIYILN RDSDDSILIS SPLEANKSKN
     LTFFTCGLDV GYDNPLFVSI ECNYEDDTNQ GKKFLNYYQL DLGLNHVLKK YSEQIPDTSN
     YLLSIPGGAD GPSGVLLCSK NLIQYKFLNK KNHSIPLPRR RNANLESFII SGIVHKMKGS
     FFILLQNNLG DLFKITIDYN SETIDNPGDV NSIEIQYFDT LPITKKLLIF KSGFLFADSE
     NSDKYLYQFE KLGDDDENAK SWNSTNYPDE ESVFEDEDVT FDIKSLDNLG LVDILESINP
     VVDTKLLKLP KTRDDSDLED IPTLYSLCGT GARSSLKILN HEILTNELVS SELPADAQKV
     FTTKLSSSDE FDKYLVLSFV DGTLVLSIGE TVEEVTNSGF SLASPTVGVQ QLGTNSVAQI
     HSNGIRYLTY DKNNQAAEPN LTEWFPPAGI KIQSCSSTST QIILGLSNRE LVYFELDEKD
     ELIEFNQRVE MSAQILSLSL GDLNAKNKLR SKFLAVGTAD EMISILSCDP DDCLEVLSTQ
     LLSSQPSDLM IMEMANQYSS GINSEAIPSS SSLYLHIGMK DGIYARVLLD ERSGEVSDSR
     RCVIGTKPVK LAHVNISNQN MIMIFSSRTF IGFNSKMSSL ANDFKVLPLK DKIFTYSFNF
     KSEDCQENGC VGVYRNNLTI FTINEVANDL LIESIGLRYT PKKMCESNKD NGIMYVIESD
     YNITSPFVKE DVAEEDLKNG QQIEHDENED VEIYQQFGYP QEQNKWGSCI QVVSTIDKSI
     LQTVELINGN QAAFSLTQCT FKKEDNGDES EGEDYLIVGV SSNQTFLPNG STENCLLCFK
     ILSNGLLKFI HKTKTDSLPL AMTSFQNKLL IGLQNNLILY DLGLKQLLRK SFASLNCKQI
     VKIEVMKDRV VIGDIRNSII FLTYTALDNK FIPFIEDVMS RHITTFKMID YDTVIGGDKF
     GNIFLLRCSS EASDMTVEDN HGTYLATKEK FLNGAPYRLN NLCNFYLQDI PTSFNKGQLS
     LNSYSGSDSL IYTGLQGTIG ILLPMVFKSE ITFFVKLQNL LREELAEYGY LITGRDNLKY
     RSYYSPTKGV IDGDLIEKFS MLNYSGKSKI SKILDRTPKE VEKKIIEMRL RVYF
//