ID A0A1E5KZY7_9ENTE Unreviewed; 443 AA.
AC A0A1E5KZY7;
DT 18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT 18-JAN-2017, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE SubName: Full=RNA polymerase sigma-54 factor {ECO:0000313|EMBL:OEH83395.1};
GN ORFNames=BCR26_10055 {ECO:0000313|EMBL:OEH83395.1};
OS Enterococcus rivorum.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Enterococcaceae;
OC Enterococcus.
OX NCBI_TaxID=762845 {ECO:0000313|EMBL:OEH83395.1, ECO:0000313|Proteomes:UP000095256};
RN [1] {ECO:0000313|EMBL:OEH83395.1, ECO:0000313|Proteomes:UP000095256}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LMG 25899 {ECO:0000313|EMBL:OEH83395.1,
RC ECO:0000313|Proteomes:UP000095256};
RA Capua I., De Benedictis P., Joannis T., Lombin L.H., Cattoli G.;
RL Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-54 factor family.
CC {ECO:0000256|ARBA:ARBA00008798}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OEH83395.1}.
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DR EMBL; MIEK01000008; OEH83395.1; -; Genomic_DNA.
DR RefSeq; WP_069697689.1; NZ_MIEK01000008.1.
DR AlphaFoldDB; A0A1E5KZY7; -.
DR STRING; 762845.BCR26_10055; -.
DR OrthoDB; 9814402at2; -.
DR Proteomes; UP000095256; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.1330; RNA polymerase sigma-54 factor, core-binding domain; 1.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR InterPro; IPR038709; RpoN_core-bd_sf.
DR NCBIfam; TIGR02395; rpoN_sigma; 1.
DR PANTHER; PTHR32248; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR PANTHER; PTHR32248:SF4; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR Pfam; PF00309; Sigma54_AID; 1.
DR Pfam; PF04963; Sigma54_CBD; 1.
DR Pfam; PF04552; Sigma54_DBD; 1.
DR PIRSF; PIRSF000774; RpoN; 1.
DR PRINTS; PR00045; SIGMA54FCT.
DR PROSITE; PS00718; SIGMA54_2; 1.
DR PROSITE; PS50044; SIGMA54_3; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000095256};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 81..267
FT /note="RNA polymerase sigma factor 54 core-binding"
FT /evidence="ECO:0000259|Pfam:PF04963"
FT DOMAIN 280..441
FT /note="RNA polymerase sigma factor 54 DNA-binding"
FT /evidence="ECO:0000259|Pfam:PF04552"
SQ SEQUENCE 443 AA; 51310 MW; 6604BE617B25D46C CRC64;
MKFQQHLSQK QKQVQKLAMT QQLQQSIQIL QYNTEDLLLY IEAKSLENPL IDIKIDTHYS
DYPTSNSSQA SFINEENNYL NQIPDSQTSL FEFLIDQVHL NYRDTYLRRL VLYLVEFVDL
NGYLKLDLDE AVEKTGASAI QMLDALTLLQ QLDPAGVGAR NIQECLMLQT ERDDQAPTLA
YIVLEEDFEN LVHRKWQAIA KKFAIDLSEV QLIFDYIQTL SPSPGRIFES TTGLYIRPDL
TLRIKDDEFT VISNKKGMPT INFQQGYFER MKKIEDQEVQ EYIKEKKLEF EWLEKTIAQR
GDTILQVGME IVRRQKDFFI RPERPLKPMI LKEVSEALDI HESTVSRAVN GKYIETSFGV
FELRSFFTSG LVTGNETGEI VSTDSVKKQL QELVANEDKA KPFSDQKLAD LLKDQEVDIS
RRTVAKYRDL LGIPASSKRK RYD
//
