ID A0A1E7FMQ9_9STRA Unreviewed; 819 AA.
AC A0A1E7FMQ9;
DT 18-JAN-2017, integrated into UniProtKB/TrEMBL.
DT 18-JAN-2017, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=PAS domain-containing protein {ECO:0000259|PROSITE:PS50112};
GN ORFNames=FRACYDRAFT_259980 {ECO:0000313|EMBL:OEU19365.1};
OS Fragilariopsis cylindrus CCMP1102.
OC Eukaryota; Sar; Stramenopiles; Ochrophyta; Bacillariophyta;
OC Bacillariophyceae; Bacillariophycidae; Bacillariales; Bacillariaceae;
OC Fragilariopsis.
OX NCBI_TaxID=635003 {ECO:0000313|EMBL:OEU19365.1, ECO:0000313|Proteomes:UP000095751};
RN [1] {ECO:0000313|EMBL:OEU19365.1, ECO:0000313|Proteomes:UP000095751}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1102 {ECO:0000313|EMBL:OEU19365.1,
RC ECO:0000313|Proteomes:UP000095751};
RG DOE Joint Genome Institute;
RA Mock T., Otillar R.P., Strauss J., Dupont C., Frickenhaus S., Maumus F.,
RA Mcmullan M., Sanges R., Schmutz J., Toseland A., Valas R., Veluchamy A.,
RA Ward B.J., Allen A., Barry K., Falciatore A., Ferrante M., Fortunato A.E.,
RA Gloeckner G., Gruber A., Hipkin R., Janech M., Kroth P., Leese F.,
RA Lindquist E., Lyon B.R., Martin J., Mayer C., Parker M., Quesneville H.,
RA Raymond J., Uhlig C., Valentin K.U., Worden A.Z., Armbrust E.V., Bowler C.,
RA Green B., Moulton V., Van Oosterhout C., Grigoriev I.;
RT "Extensive genetic diversity and differential bi-allelic expression allows
RT diatom success in the polar Southern Ocean.";
RL Submitted (SEP-2016) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KV784355; OEU19365.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1E7FMQ9; -.
DR EnsemblProtists; OEU19365; OEU19365; FRACYDRAFT_259980.
DR KEGG; fcy:FRACYDRAFT_259980; -.
DR InParanoid; A0A1E7FMQ9; -.
DR OrthoDB; 38535at2759; -.
DR Proteomes; UP000095751; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd14686; bZIP; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR004827; bZIP.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR PANTHER; PTHR23353; RAB-GAP/TBC-RELATED; 1.
DR PANTHER; PTHR23353:SF32; WHITE-OPAQUE REGULATOR 3; 1.
DR Pfam; PF07716; bZIP_2; 1.
DR SMART; SM00338; BRLZ; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000095751}.
FT DOMAIN 544..614
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT REGION 176..215
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 300..332
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 360..396
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 493..531
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 670..747
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 769..819
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 670..703
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 711..747
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 769..787
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 788..804
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 819 AA; 86300 MW; 5BF0A05395F056DF CRC64;
MRHESSTSTI FNPSVFDLLS KPTSFFSDLC SSGSDTAAQS AAPIAAATTT TNGKNGSIAG
DANCTSTNSI ASSVVGPPSV ITTSTTAAMS NNPSALPPPP MISMNNMNGA GAAGMNNLNM
NNMFSHLTPQ QIIAAATNLR VPLAAGNAAN TANNTAGGGG IMDPLMLQSL LFSAGLTQNN
NNNNQYPAGS QQQQQQQQPS PASNSSNNNN TNNNNAVLAN TMQQLAIQQF LQQQQQAAVK
VQQQQQQQAA HAQAQAAAAA LSSHPQAALF AAMAALAAGG NVNANVNANA NNNRGATTQA
TVGGVQQQQQ YLPPQSANTT TTTTTTSGGA ALSTANNATT MAPTNNNVLL GCAPQQQQQQ
SLSASQQQQQ QQFHQQVVPN STSSGGFLKK QPTAAVQSHS QSVQQFSCLA PTTNPVTSNA
APVAVQSSTA AASSSTSSSS SSLMKVAPAG GRILPTTELS SASAMSNNSV NNNNNYSNNY
LFKLDNNYKT KESAGAVTSS STSSGKKKPG DKKQIKRAAN RRSAQLSRKR KKQFIEELKE
ENDDLRRKEQ ILRAIPDLIV VFDSSGKLGF VSESIGRFLD VFPEALEGTS FWDLICEDSV
RLLKAAFMDS LAARDPDSDT ALLGSGVWEL RLKNKDSKYM LVTLNGVVHF KGEAPECVCC
IRPLRSEQQQ QQQQSSPQSS KRQVSVTVDG SSNININVDG VNDDDGSNNK DKNNVSCSDG
DASRTSDGSN GTQQQSVLSR INPSGLSIQA QDEVATEAKH RNKKFRRMMH HQADEEADNK
KNNHNHVING GEADGTNNSV RISDGDIDSL DGLDSDESN
//
