ID A0A1F1ZLK4_9CORY Unreviewed; 705 AA.
AC A0A1F1ZLK4;
DT 15-FEB-2017, integrated into UniProtKB/TrEMBL.
DT 15-FEB-2017, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE RecName: Full=Exonuclease domain-containing protein {ECO:0000259|SMART:SM00479};
GN ORFNames=HMPREF3098_08080 {ECO:0000313|EMBL:OFT88373.1};
OS Corynebacterium sp. HMSC28B08.
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales;
OC Corynebacteriaceae; Corynebacterium.
OX NCBI_TaxID=1581066 {ECO:0000313|EMBL:OFT88373.1, ECO:0000313|Proteomes:UP000177449};
RN [1] {ECO:0000313|EMBL:OFT88373.1, ECO:0000313|Proteomes:UP000177449}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HMSC28B08 {ECO:0000313|EMBL:OFT88373.1,
RC ECO:0000313|Proteomes:UP000177449};
RA Evans L.H., Alamgir A., Owens N., Weber N.D., Virtaneva K., Barbian K.,
RA Babar A., Rosenke K.;
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OFT88373.1}.
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DR EMBL; LWOT01000059; OFT88373.1; -; Genomic_DNA.
DR RefSeq; WP_070434726.1; NZ_KV786173.1.
DR AlphaFoldDB; A0A1F1ZLK4; -.
DR STRING; 1581066.HMPREF3098_08080; -.
DR OrthoDB; 3928741at2; -.
DR Proteomes; UP000177449; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
DR GO; GO:0004527; F:exonuclease activity; IEA:UniProt.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06127; DEDDh; 1.
DR Gene3D; 3.40.50.10190; BRCT domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR036420; BRCT_dom_sf.
DR InterPro; IPR006054; DnaQ.
DR InterPro; IPR013520; Exonuclease_RNaseT/DNA_pol3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR029024; TerB-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR00573; dnaq; 1.
DR PANTHER; PTHR30231; DNA POLYMERASE III SUBUNIT EPSILON; 1.
DR PANTHER; PTHR30231:SF4; PROTEIN NEN2; 1.
DR Pfam; PF00929; RNase_T; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR SMART; SM00479; EXOIII; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF158682; TerB-like; 1.
PE 4: Predicted;
FT DOMAIN 6..171
FT /note="Exonuclease"
FT /evidence="ECO:0000259|SMART:SM00479"
SQ SEQUENCE 705 AA; 76568 MW; 237293F9C7CC70B4 CRC64;
MHNPQRYAVI DLETTGFSKS DRVIEIGVVL LDQAGNVERT WETIVQPNRD IPNSFVHKLT
PSHLVHAPQF EDIAGELAEI LHGRTIIAHN APFDIRFLTT EFERIGVTLP AYGAWVHDTL
PLCRQCFPET NGSLDKVAKL LGITNDRPHA ALADALATAE IYRHLRNDLG RVASGAASLA
VPPTTYPRRG RAISRDDATG AAPHDGSWLA GLAAKLPGGR GTADSDRYRK LLAAALTDRH
LSASEIKQLE ESAVRDGISH DDILAIHEDF LRQLSVEAWL DGVVTEEEKH TLRTVAGQLG
VDANLTEQLI ATPQTGEQTV GLALTPGDRV TFTGQLDLPR GEWEQRAKSV GLDVGGVTKK
SVLVVAANPD STSGKARKAR DLGVPIIGER VFAQLLSAMT EAETSPEPDL DAAGVHSTEP
QEIALFPWLR EVEFEAGEEF DTLRAAELWI EHHPTRALHS LSHVFGGVQG EEARGQNHGG
MLELRVDTPT ERRWMELFVN PLDASVMDLQ GVKGMGKQRV RNAVERVVLA AIDAEEATGE
HLEDDDRLGA GMYGGLADEF YDSEGDGAGV ESVTGAVATA GVATRSGLRS GEMLASVPTN
EVRLWLGWLQ LSGMNAEAAG SVVPTADDSL AEYVPNLIDS CGEVDPVEDV FRVAVDPLRA
ATRGDNRKWL ILMERWFGAA TLDELGQRMG VTRERVRQLE KQMAE
//
